Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03352 and BPUM_1983

See DNA alignment / Visit BSNT_03352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_03352___ypjB.1.24716.seq
#    -bsequence pep-align/BPUM_1983___ypjB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03352___ypjB-BPUM_1983___ypjB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03352___ypjB-BPUM_1983___ypjB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03352___ypjB
# 2: BPUM_1983___ypjB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     149/270 (55.2%)
# Similarity:   205/270 (75.9%)
# Gaps:           9/270 ( 3.3%)
# Score: 757.0
# 
#
#=======================================

BSNT_03352___      1 MKRK-LTICLLIALIFYNGNAKAAERGS--LEELNDLSDTVFQMTRQAKY     47
                     |||| :.|.||..|:.....||..|..:  |:||.:|||::||:||||||
BPUM_1983___y      1 MKRKPIAIILLFFLVLQPSVAKGEETAASVLQELTELSDSIFQLTRQAKY     50

BSNT_03352___     48 EEALQVLEYFEKTLKSAEKKQQDPMLTGSQIRQITLGYNDMVRSLKQADT     97
                     :|||||..|.|||.|:...:   ..||.:||||||:||.|:::.|.|.:.
BPUM_1983___y     51 DEALQVALYVEKTFKAENWR---GTLTNTQIRQITVGYQDIIKGLPQEEL     97

BSNT_03352___     98 SDTQKLRAAAQFRMLMDAVENRSDPLWGSLEKPIMEAFTELKRDVQKNGS    147
                     ::.:|||.|:|||||:||:::.|:|||||||||:|.:|..||::|:...|
BPUM_1983___y     98 NEREKLRYASQFRMLLDAIQSDSEPLWGSLEKPVMGSFPTLKKEVKDPES    147

BSNT_03352___    148 TSFHEKWNEFISLYDLIYPSLTIDVSEDQLETVGKHIDVIEQEEFQQMTE    197
                     |:|:|.|||.:||||:||||||||||.::|:|:.:|::||||.||.:.:.
BPUM_1983___y    148 TTFYETWNELVSLYDMIYPSLTIDVSPEKLQTIKQHMEVIEQGEFLKASS    197

BSNT_03352___    198 STKLERLSLLQHDLKNVFDRVEEDDADPSLLWVMITTGSIIITALTYVGY    247
                     .||||||:.|:.||.:||..|::|:||||||||::||||||:..|||||:
BPUM_1983___y    198 GTKLERLTKLEEDLSSVFAHVDQDEADPSLLWVILTTGSIILLTLTYVGF    247

BSNT_03352___    248 RKYKAEKNKLKKR--DYPK-    264
                     |||:|||.|.:||  |||| 
BPUM_1983___y    248 RKYRAEKEKKQKRQADYPKS    267


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