Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03350 and BPUM_1982

See DNA alignment / Visit BSNT_03350 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_03350.1.24716.seq
#    -bsequence pep-align/BPUM_1982___ypjC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03350-BPUM_1982___ypjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03350-BPUM_1982___ypjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03350
# 2: BPUM_1982___ypjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     241/291 (82.8%)
# Similarity:   269/291 (92.4%)
# Gaps:           2/291 ( 0.7%)
# Score: 1242.0
# 
#
#=======================================

BSNT_03350         1 MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFH     50
                     ||.|||||||.|||||:|||||||||||||||||||||||||||||.|||
BPUM_1982___y      1 MLKEIRLKNIVFILIGSAIFSFGLVHFNMQNNLAEGGFTGITLLLYFLFH     50

BSNT_03350        51 ISPSISNLVLNIPIFFIGWRLLGRTMFVYTLVGTVALSLFLSIFQRYEIH    100
                     |.|||||||||||||||||::||||||.||:||||:||:||:||||::||
BPUM_1982___y     51 IDPSISNLVLNIPIFFIGWKMLGRTMFTYTIVGTVSLSVFLAIFQRFQIH    100

BSNT_03350       101 MPLQHDLALAALFAGVFIGAGLGIIFKFGGTTGGVDIIARLVNKYFGIPM    150
                     |||||||||||||||||||.|||||||||||||||||||||:||::.:.|
BPUM_1982___y    101 MPLQHDLALAALFAGVFIGTGLGIIFKFGGTTGGVDIIARLINKHYQVAM    150

BSNT_03350       151 GRTMFAFDACVIILSLLTYLSYKEAMYTLVAVFVAARLIDFIQEGGYAAK    200
                     |||||.||||||.:| ||||:|||||||||||||||::|||:|||.||||
BPUM_1982___y    151 GRTMFIFDACVITIS-LTYLNYKEAMYTLVAVFVAAKVIDFMQEGAYAAK    199

BSNT_03350       201 GATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDVLYCVVPKNEL    250
                     ||.|||.|:|:|||||.||||||||:|||.|||||::.:|||||||||||
BPUM_1982___y    200 GAMIISEKDDIIQKKITEEMERGVTVLKGVGSYTKQERNVLYCVVPKNEL    249

BSNT_03350       251 VMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPL-PR    290
                     |.||||:.|:||||||:||||||||||||||||:|.|| |.
BPUM_1982___y    250 VHLKSVVTSVDPHAFVSVSDVHDVLGEGFTLDEHKKPLNPH    290


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.