Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03349 and BPUM_1981

See DNA alignment / Visit BSNT_03349 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_03349___ypjD.1.24716.seq
#    -bsequence pep-align/BPUM_1981___ypjD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03349___ypjD-BPUM_1981___ypjD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03349___ypjD-BPUM_1981___ypjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03349___ypjD
# 2: BPUM_1981___ypjD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      94/112 (83.9%)
# Similarity:   102/112 (91.1%)
# Gaps:           2/112 ( 1.8%)
# Score: 488.0
# 
#
#=======================================

BSNT_03349___      1 -MSDKTMKDIQAEVDRYIGQFKEGYFSPLAMMARLTEELGELAREVNHRY     49
                      .::||::.:|.|||.||||||||||||||||||||||||||||||||.|
BPUM_1981___y      1 MTNEKTLRYVQQEVDDYIGQFKEGYFSPLAMMARLTEELGELAREVNHYY     50

BSNT_03349___     50 GEKPKKATEDDKSMEEEMGDVLFVLVCLANSLDISLEEAHDRVMHKFNTR     99
                     ||||||.||.:||||||:|||||||.||||||||||||||||||||||||
BPUM_1981___y     51 GEKPKKTTETEKSMEEEIGDVLFVLTCLANSLDISLEEAHDRVMHKFNTR    100

BSNT_03349___    100 DKDRWTRKEEGK    111
                     ||||||:| |||
BPUM_1981___y    101 DKDRWTKK-EGK    111


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