Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03348 and BPUM_1980

See DNA alignment / Visit BSNT_03348 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_03348___dapB.1.24716.seq
#    -bsequence pep-align/BPUM_1980___dapB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03348___dapB-BPUM_1980___dapB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03348___dapB-BPUM_1980___dapB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03348___dapB
# 2: BPUM_1980___dapB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     218/267 (81.6%)
# Similarity:   241/267 (90.3%)
# Gaps:           0/267 ( 0.0%)
# Score: 1121.0
# 
#
#=======================================

BSNT_03348___      1 MSNETIKVVIAGPRGRMGQEAVKLAERTPHFDLVGAIDHTYDQQKLSDVM     50
                     |:|:||||||||.|||||.|||||||.|.||:||.|:||.::.:|||||:
BPUM_1980___d      1 MTNQTIKVVIAGARGRMGIEAVKLAEETSHFELVAALDHAHEGKKLSDVI     50

BSNT_03348___     51 PVESDAFIYTDIHACFTETQPDVLIDLTTPEIGKVHTKIALEHGVRPVVG    100
                     ...|:|.|||||..|.:||.||||||||||||||||||.|||||||||||
BPUM_1980___d     51 HTTSEAPIYTDIDVCLSETAPDVLIDLTTPEIGKVHTKKALEHGVRPVVG    100

BSNT_03348___    101 TTGFSEADLKELTSLTEEKGIGAIIAPNFALGAILMMKFSKMAANYFEDV    150
                     ||||||||||||..||||||||.|||||||:||:|||||:|||||||.||
BPUM_1980___d    101 TTGFSEADLKELQQLTEEKGIGCIIAPNFAVGAVLMMKFAKMAANYFPDV    150

BSNT_03348___    151 EIIELHHDQKLDAPSGTALKTAEMISEVRKEKQQGHPDEKEILPGARGAE    200
                     ||||||||:||||||||.|||||||:|||:.|:||||||||::.|||||:
BPUM_1980___d    151 EIIELHHDKKLDAPSGTGLKTAEMIAEVRESKKQGHPDEKELIEGARGAD    200

BSNT_03348___    201 QNGIRLHSVRLPGLIAHQEVMFGMDGQTLQIRHDSYNRASFMSGVKLSVE    250
                     .:|||||||||||:||||||:||||||||.||||||||||||||||||||
BPUM_1980___d    201 YDGIRLHSVRLPGMIAHQEVLFGMDGQTLTIRHDSYNRASFMSGVKLSVE    250

BSNT_03348___    251 QVMKIDQLVYGLENIID    267
                     |||.|||||||||||||
BPUM_1980___d    251 QVMHIDQLVYGLENIID    267


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