Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03347 and BPUM_1979

See DNA alignment / Visit BSNT_03347 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_03347___mgsA.1.24716.seq
#    -bsequence pep-align/BPUM_1979___mgsA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03347___mgsA-BPUM_1979___mgsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03347___mgsA-BPUM_1979___mgsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03347___mgsA
# 2: BPUM_1979___mgsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:     106/139 (76.3%)
# Similarity:   119/139 (85.6%)
# Gaps:           2/139 ( 1.4%)
# Score: 552.0
# 
#
#=======================================

BSNT_03347___      1 MKIALIAHDKKKQDMVQFTTAYRDILKNHDLYATGTTGLKIQEATGLQIE     50
                     |.||||||||||.||:||..||||||.:|.|||||||||:::|||||.|.
BPUM_1979___m      1 MNIALIAHDKKKSDMIQFAIAYRDILADHTLYATGTTGLRVKEATGLPIH     50

BSNT_03347___     51 RFQSGPLGGDQQIGALIAANALDLVIFLRDPLTAQPHEPDVSALIRLCDV    100
                     ||||||||||||||||||.||:|||:|.||||||||||||||||||||||
BPUM_1979___m     51 RFQSGPLGGDQQIGALIADNAMDLVLFFRDPLTAQPHEPDVSALIRLCDV    100

BSNT_03347___    101 YSIPLATNMGTAEILVRTLDEGVFEFRDLLRGEEPNV--    137
                     |:|||||||||||||||.|::|.|:|||:.:....|.  
BPUM_1979___m    101 YTIPLATNMGTAEILVRNLNKGTFDFRDVAKNGGTNETT    139


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