Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03347 and BPUM_1979
See
DNA alignment /
Visit
BSNT_03347 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence pep-align/BSNT_03347___mgsA.1.24716.seq
# -bsequence pep-align/BPUM_1979___mgsA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03347___mgsA-BPUM_1979___mgsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03347___mgsA-BPUM_1979___mgsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03347___mgsA
# 2: BPUM_1979___mgsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity: 106/139 (76.3%)
# Similarity: 119/139 (85.6%)
# Gaps: 2/139 ( 1.4%)
# Score: 552.0
#
#
#=======================================
BSNT_03347___ 1 MKIALIAHDKKKQDMVQFTTAYRDILKNHDLYATGTTGLKIQEATGLQIE 50
|.||||||||||.||:||..||||||.:|.|||||||||:::|||||.|.
BPUM_1979___m 1 MNIALIAHDKKKSDMIQFAIAYRDILADHTLYATGTTGLRVKEATGLPIH 50
BSNT_03347___ 51 RFQSGPLGGDQQIGALIAANALDLVIFLRDPLTAQPHEPDVSALIRLCDV 100
||||||||||||||||||.||:|||:|.||||||||||||||||||||||
BPUM_1979___m 51 RFQSGPLGGDQQIGALIADNAMDLVLFFRDPLTAQPHEPDVSALIRLCDV 100
BSNT_03347___ 101 YSIPLATNMGTAEILVRTLDEGVFEFRDLLRGEEPNV-- 137
|:|||||||||||||||.|::|.|:|||:.:....|.
BPUM_1979___m 101 YTIPLATNMGTAEILVRNLNKGTFDFRDVAKNGGTNETT 139
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.