Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03345 and BPUM_1977
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence pep-align/BSNT_03345___ypjH.1.24716.seq
# -bsequence pep-align/BPUM_1977.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03345___ypjH-BPUM_1977.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03345___ypjH-BPUM_1977.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03345___ypjH
# 2: BPUM_1977
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity: 273/381 (71.7%)
# Similarity: 326/381 (85.6%)
# Gaps: 4/381 ( 1.0%)
# Score: 1433.0
#
#
#=======================================
BSNT_03345___ 1 MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYH 50
|:|||:||||||||||||||||||||:||||||::||||||||||||..:
BPUM_1977 1 MKKLKVGITCYPSVGGSGIIATELGKRLAEKGHDVHFITSSIPFRLNKVY 50
BSNT_03345___ 51 PNIHFHEVEVNQYAVFKYPPYDLTLASKIAEVAERENLDIIHAHYALPHA 100
|||:||||:|||||||:||||||.||||:||||.||.|||||||||:|||
BPUM_1977 51 PNIYFHEVDVNQYAVFQYPPYDLALASKLAEVARREKLDIIHAHYAVPHA 100
BSNT_03345___ 101 VCAYLAKQMLKRNIGIVTTLHGTDITVLGYDPSLKDLIRFAIESSDRVTA 150
|||||||||...::.:|||||||||||||||||||::|||||||||||||
BPUM_1977 101 VCAYLAKQMTGHSVKVVTTLHGTDITVLGYDPSLKEVIRFAIESSDRVTA 150
BSNT_03345___ 151 VSSALAAETYDLIKPEKKIETIYNFIDERVYLKKNTAVIKEKHGILPDEK 200
||.:|||:|||||||.||||||:||:||||||:.:..|:|..:|:|..||
BPUM_1977 151 VSHSLAAQTYDLIKPNKKIETIHNFVDERVYLRDDHNVLKRHYGLLDHEK 200
BSNT_03345___ 201 VVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPEKSTACELIRK 250
||||||||||||||.|||.||:.|:.:..|||||:|||||||..|||::|
BPUM_1977 201 VVIHVSNFRKVKRVHDVIHVFKKISEQVNAKLLLIGDGPEKSVVCELVKK 250
BSNT_03345___ 251 YGLEDQVLMLGNQDRVEELYSISDLKLLLSEKESFGLVLLEAMACGVPCI 300
.||.|:||.||.|::|||||||||||||||||||||||||||||||||||
BPUM_1977 251 LGLTDRVLFLGKQEKVEELYSISDLKLLLSEKESFGLVLLEAMACGVPCI 300
BSNT_03345___ 301 GTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAI 350
||::|||||||.:..:||||.:||:.||...|:|||:|:.|..:.:.||.
BPUM_1977 301 GTDVGGIPEVITHGETGFLVPLGDIDAAAKHAVSILKDKALHEQVSAAAQ 350
BSNT_03345___ 351 EMLENEFSSKKIVSQYEQIYADLAEPE---- 377
..::..|||:||||:||::|.:|.|.:
BPUM_1977 351 SSVQAHFSSEKIVSEYEELYLELIEGDDEHE 381
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