Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03345 and BPUM_1977

See DNA alignment / Visit BSNT_03345 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:51
# Commandline: needle
#    -asequence pep-align/BSNT_03345___ypjH.1.24716.seq
#    -bsequence pep-align/BPUM_1977.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03345___ypjH-BPUM_1977.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03345___ypjH-BPUM_1977.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03345___ypjH
# 2: BPUM_1977
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity:     273/381 (71.7%)
# Similarity:   326/381 (85.6%)
# Gaps:           4/381 ( 1.0%)
# Score: 1433.0
# 
#
#=======================================

BSNT_03345___      1 MRKLKIGITCYPSVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNTYH     50
                     |:|||:||||||||||||||||||||:||||||::||||||||||||..:
BPUM_1977          1 MKKLKVGITCYPSVGGSGIIATELGKRLAEKGHDVHFITSSIPFRLNKVY     50

BSNT_03345___     51 PNIHFHEVEVNQYAVFKYPPYDLTLASKIAEVAERENLDIIHAHYALPHA    100
                     |||:||||:|||||||:||||||.||||:||||.||.|||||||||:|||
BPUM_1977         51 PNIYFHEVDVNQYAVFQYPPYDLALASKLAEVARREKLDIIHAHYAVPHA    100

BSNT_03345___    101 VCAYLAKQMLKRNIGIVTTLHGTDITVLGYDPSLKDLIRFAIESSDRVTA    150
                     |||||||||...::.:|||||||||||||||||||::|||||||||||||
BPUM_1977        101 VCAYLAKQMTGHSVKVVTTLHGTDITVLGYDPSLKEVIRFAIESSDRVTA    150

BSNT_03345___    151 VSSALAAETYDLIKPEKKIETIYNFIDERVYLKKNTAVIKEKHGILPDEK    200
                     ||.:|||:|||||||.||||||:||:||||||:.:..|:|..:|:|..||
BPUM_1977        151 VSHSLAAQTYDLIKPNKKIETIHNFVDERVYLRDDHNVLKRHYGLLDHEK    200

BSNT_03345___    201 VVIHVSNFRKVKRVQDVIRVFRNIAGKTKAKLLLVGDGPEKSTACELIRK    250
                     ||||||||||||||.|||.||:.|:.:..|||||:|||||||..|||::|
BPUM_1977        201 VVIHVSNFRKVKRVHDVIHVFKKISEQVNAKLLLIGDGPEKSVVCELVKK    250

BSNT_03345___    251 YGLEDQVLMLGNQDRVEELYSISDLKLLLSEKESFGLVLLEAMACGVPCI    300
                     .||.|:||.||.|::|||||||||||||||||||||||||||||||||||
BPUM_1977        251 LGLTDRVLFLGKQEKVEELYSISDLKLLLSEKESFGLVLLEAMACGVPCI    300

BSNT_03345___    301 GTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAI    350
                     ||::|||||||.:..:||||.:||:.||...|:|||:|:.|..:.:.||.
BPUM_1977        301 GTDVGGIPEVITHGETGFLVPLGDIDAAAKHAVSILKDKALHEQVSAAAQ    350

BSNT_03345___    351 EMLENEFSSKKIVSQYEQIYADLAEPE----    377
                     ..::..|||:||||:||::|.:|.|.:    
BPUM_1977        351 SSVQAHFSSEKIVSEYEELYLELIEGDDEHE    381


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