Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03344 and BPUM_1976
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:51
# Commandline: needle
# -asequence pep-align/BSNT_03344___cca.1.24716.seq
# -bsequence pep-align/BPUM_1976___cca.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03344___cca-BPUM_1976___cca.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03344___cca-BPUM_1976___cca.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03344___cca
# 2: BPUM_1976___cca
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 215/402 (53.5%)
# Similarity: 293/402 (72.9%)
# Gaps: 7/402 ( 1.7%)
# Score: 1079.5
#
#
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BSNT_03344___ 1 MEKVFIKALPVLRILIEAGHQAYFVGGAVRDSYMKRTIGDVDIATDAAPD 50
|.:.|..|:|:|..|.|.|:|||||||||||..:.|.|||:||||||.||
BPUM_1976___c 1 MNEPFTHAIPILHTLHEHGYQAYFVGGAVRDVLLGREIGDIDIATDATPD 50
BSNT_03344___ 51 QVERLFQRTVDVGKEHGTIIVLWEDETYEVTTFRTESDYVDFRRPSEVQF 100
.||.||::||||||||||:|||.:..:||||||||||:|.|||||.||.|
BPUM_1976___c 51 TVESLFEKTVDVGKEHGTVIVLHDGMSYEVTTFRTESEYEDFRRPKEVAF 100
BSNT_03344___ 101 ISSLEEDLKRRDLTINAMAMTADGKVLDYFGGKKDIDQKVIRTVGKPEDR 150
|:||:|||.|||||||||||..:|:::|:.|||:||::|.|:|||.|..|
BPUM_1976___c 101 ITSLKEDLLRRDLTINAMAMDINGEIIDHVGGKQDIERKRIQTVGDPACR 150
BSNT_03344___ 151 FQEDALRMLRAVRFMSQLGFTLSPETEEAIAKEKSLLSHVSVERKTIEFE 200
||||||||:||:||:|||||.|:.||.||:.|:|.||:::|||||.||.|
BPUM_1976___c 151 FQEDALRMMRAIRFLSQLGFELAAETAEAMEKDKHLLANISVERKKIEME 200
BSNT_03344___ 201 KLLQGRASRQALQTLIQTRLYEELPGFYHKRENL-ISTSEFPFFSLTSRE 249
|||:||...:|::.||.|:|||||||. :::.| .|...||::.|...|
BPUM_1976___c 201 KLLKGRYCERAIKVLISTKLYEELPGL--EKDRLQDSFQTFPYYLLDGLE 248
BSNT_03344___ 250 ELWAALLINLGIVLKDAPLFLKGWKLPGKVIKEAIHIADTFGQSLDVMTM 299
|:|.|::..||:..:.|.||||.|||..|::|:|:.|:.......:...|
BPUM_1976___c 249 EVWGAVIHLLGLDEEKAVLFLKEWKLSTKLLKDAVAISRYVDCEWNAEKM 298
BSNT_03344___ 300 YRAGEKALLSAAKISQLRQNEKLDEKKLKDIQYAYQNLPIKSLKDLDITG 349
:.|||..|||:.||:||:...::...:|:..:.:|..||||:|:||.::|
BPUM_1976___c 299 FEAGEHVLLSSLKITQLKHERRIFFDELEAAKSSYDALPIKTLQDLAVSG 348
BSNT_03344___ 350 KDLLALRNRPAGKWVSEELQRIEQAVVTGKLSNQKKHIEEWLKTCGQH-- 397
|||:|.|.:.:|||::|||..:::||:...|.|:|:.|||||..|.|.
BPUM_1976___c 349 KDLMAFRQKTSGKWIAEELDLVKKAVLHNHLENRKEAIEEWLTACDQQLE 398
BSNT_03344___ 397 -- 397
BPUM_1976___c 399 ND 400
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