Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03341 and BPUM_1974

See DNA alignment / Visit BSNT_03341 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_03341___panB.1.24716.seq
#    -bsequence pep-align/BPUM_1974___panB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03341___panB-BPUM_1974___panB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03341___panB-BPUM_1974___panB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03341___panB
# 2: BPUM_1974___panB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     213/279 (76.3%)
# Similarity:   240/279 (86.0%)
# Gaps:           2/279 ( 0.7%)
# Score: 1103.0
# 
#
#=======================================

BSNT_03341___      1 MKTKLDFLKMKESEEPIVMLTAYDYPAAKLAEQAGVDMILVGDSLGMVVL     50
                     |||||||.||||..||||||||||||:||.||:|.|||||||||||||||
BPUM_1974___p      1 MKTKLDFFKMKEQNEPIVMLTAYDYPSAKQAEKAEVDMILVGDSLGMVVL     50

BSNT_03341___     51 GLDSTVGVTVADMIHHTKAVKRGAPNTFIVTDMPFMSYHLSKEDTLKNAA    100
                     |||||:.||:.|||||||||||||.:|||||||||||||.|..:||||||
BPUM_1974___p     51 GLDSTIQVTIDDMIHHTKAVKRGAKDTFIVTDMPFMSYHYSLAETLKNAA    100

BSNT_03341___    101 AIVQESGADALKLEGGEGVFESIRALTLGGIPVVSHLGLTPQSVGVLGGY    150
                     .|:|||||||||||||:||||||:|||.||||||||||||||||||||||
BPUM_1974___p    101 RIMQESGADALKLEGGDGVFESIQALTRGGIPVVSHLGLTPQSVGVLGGY    150

BSNT_03341___    151 KVQGKDEQSAKKLIEDSIKCEEAGAMMLVLECVPAELTAKIADTLSIPVI    200
                     ||||||.:||:||||||:|||||||:.|||||||.|||.:|.|.|.||||
BPUM_1974___p    151 KVQGKDHESAQKLIEDSLKCEEAGAIALVLECVPGELTKRITDMLKIPVI    200

BSNT_03341___    201 GIGAGVKADGQVLVYHDIIGHGVERTPKFVKQYTRIDETIETAISGYVQD    250
                     |||||.:||||||||||::|:||.|||||||||.:||..:|.|:..|.::
BPUM_1974___p    201 GIGAGAEADGQVLVYHDVVGYGVSRTPKFVKQYAQIDTLLEEALIQYTKE    250

BSNT_03341___    251 VRHRAFPEQKHSFQMNQTVLDGLYGGK--    277
                     |:...|||.||:|.:.:.||||||||.  
BPUM_1974___p    251 VKAHTFPEDKHTFHIKEEVLDGLYGGIKK    279


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