Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03339 and BPUM_1973

See DNA alignment / Visit BSNT_03339 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_03339___panC.1.24716.seq
#    -bsequence pep-align/BPUM_1973___panC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03339___panC-BPUM_1973___panC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03339___panC-BPUM_1973___panC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03339___panC
# 2: BPUM_1973___panC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     184/288 (63.9%)
# Similarity:   224/288 (77.8%)
# Gaps:           2/288 ( 0.7%)
# Score: 963.0
# 
#
#=======================================

BSNT_03339___      1 MRQITDITQLKEAIKQYHSEGKSIGFVPTMGFLHEGHLTLADKARQENDA     50
                     |..:|.|.:|||.|||:..:..|||||||||||||||||||.:||.:||.
BPUM_1973___p      1 MNVVTHIHELKELIKQHQEKQHSIGFVPTMGFLHEGHLTLAKEARDQNDL     50

BSNT_03339___     51 VIMSIFVNPAQFGPNEDFEAYPRDIERDAALAENAGVDILFTPDAHDMYP    100
                     |:|||||||.|||||||||:||||:|||..||:.||||||||||..:||.
BPUM_1973___p     51 VVMSIFVNPLQFGPNEDFESYPRDMERDQRLAKEAGVDILFTPDVKEMYA    100

BSNT_03339___    101 GEKNVTIHVERRTDVLCGRSREGHFDGVAIVLTKLFNLVKPTRAYFGLKD    150
                     .|.::|:.|.:|||||||:.|.||||||..||||||:||.||.|||||||
BPUM_1973___p    101 NEPSITMTVRKRTDVLCGKKRPGHFDGVVTVLTKLFHLVAPTNAYFGLKD    150

BSNT_03339___    151 AQQVAVVDGLISDFFMDIELVPVDTVREEDGLAKSSRNVYLTAEERKEAP    200
                     ||||||:|.:|.|||.|:.||.|.|||||||||||||||||:.:||:|||
BPUM_1973___p    151 AQQVAVIDAMIKDFFFDLHLVSVPTVREEDGLAKSSRNVYLSDKERQEAP    200

BSNT_03339___    201 KLYRALQTSAELIQAGERDPEAVIKAAKEIIETTSGTIDYVELYSYPELE    250
                     .|||||:.....|:.||||...:.:..:|.|..|||.|||:|:|||||||
BPUM_1973___p    201 ALYRALKKGQSAIENGERDVSRIYQLVEEDILQTSGEIDYIEIYSYPELE    250

BSNT_03339___    251 PVNEIAGKMILAVAVAFSKARLIDNIIIDIREMERI--    286
                     |:.::||::|:|:||.||:||||||:|..:.|....  
BPUM_1973___p    251 PLQQLAGQVIIAIAVKFSRARLIDNVIFHVPESGEKHV    288


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