Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03338 and BPUM_1972

See DNA alignment / Visit BSNT_03338 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_03338___panD.1.24716.seq
#    -bsequence pep-align/BPUM_1972___panD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03338___panD-BPUM_1972___panD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03338___panD-BPUM_1972___panD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03338___panD
# 2: BPUM_1972___panD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      99/127 (78.0%)
# Similarity:   114/127 (89.8%)
# Gaps:           0/127 ( 0.0%)
# Score: 510.0
# 
#
#=======================================

BSNT_03338___      1 MYRTMMSGKLHRATVTEANLNYVGSITIDEDLIDAVGMLPNEKVQIVNNN     50
                     ||||.|:.|||:||||||||:|||||||||||:||.||:.|||||||||:
BPUM_1972___p      1 MYRTFMTSKLHKATVTEANLHYVGSITIDEDLLDAAGMMANEKVQIVNNH     50

BSNT_03338___     51 NGARLETYIIPGKRGSGVICLNGAAARLVQEGDKVIIISYKMMSDQEAAS    100
                     ||||||||||||:|.|||||||||||||||.||:||||:|.|:|:.||.:
BPUM_1972___p     51 NGARLETYIIPGERKSGVICLNGAAARLVQPGDEVIIIAYGMLSEGEAKT    100

BSNT_03338___    101 HEPKVAVLNDQNKIEQMLGNEPARTIL    127
                     |.|||.|||.:|:||||:|.|||||||
BPUM_1972___p    101 HTPKVVVLNKENQIEQMIGQEPARTIL    127


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