Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03335 and BPUM_1969
See
DNA alignment /
Visit
BSNT_03335 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence pep-align/BSNT_03335___ypmB.1.24716.seq
# -bsequence pep-align/BPUM_1969___ypmB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03335___ypmB-BPUM_1969___ypmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03335___ypmB-BPUM_1969___ypmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03335___ypmB
# 2: BPUM_1969___ypmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity: 81/161 (50.3%)
# Similarity: 115/161 (71.4%)
# Gaps: 0/161 ( 0.0%)
# Score: 442.0
#
#
#=======================================
BSNT_03335___ 1 MRKKALIFTVIFGIIFLAVLLVSASIYKSAMAQKEEGHEAAAAEAKKETD 50
|:|...|.:.:...:.|..::....||:.||.|||:|||.|...|||:.|
BPUM_1969___y 1 MKKIVWIISSVVAFVLLIGIISFTWIYQIAMGQKEQGHETAIERAKKQAD 50
BSNT_03335___ 51 LANVDQVETFVGKEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGI 100
:..|:||||||||||.::|:|.:|:....||||||.||.|:::|.||:|:
BPUM_1969___y 51 IVQVEQVETFVGKEKQFIVEGKNKQNETTYVWVPASKKEKVIAKRAKDGV 100
BSNT_03335___ 101 SEDKAAKIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYSLSYVDF 150
:.::|.:.::.|..|||.|:|.|||||:|||||||||::..|||.|||||
BPUM_1969___y 101 TSNQAVQAVQKENTVSKLKDVQLAREGDVLLWEVTYLNENNQYSFSYVDF 150
BSNT_03335___ 151 TTGKILKNITP 161
:||.:.||:||
BPUM_1969___y 151 STGHVEKNVTP 161
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.