Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03335 and BPUM_1969

See DNA alignment / Visit BSNT_03335 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence pep-align/BSNT_03335___ypmB.1.24716.seq
#    -bsequence pep-align/BPUM_1969___ypmB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03335___ypmB-BPUM_1969___ypmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03335___ypmB-BPUM_1969___ypmB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03335___ypmB
# 2: BPUM_1969___ypmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 161
# Identity:      81/161 (50.3%)
# Similarity:   115/161 (71.4%)
# Gaps:           0/161 ( 0.0%)
# Score: 442.0
# 
#
#=======================================

BSNT_03335___      1 MRKKALIFTVIFGIIFLAVLLVSASIYKSAMAQKEEGHEAAAAEAKKETD     50
                     |:|...|.:.:...:.|..::....||:.||.|||:|||.|...|||:.|
BPUM_1969___y      1 MKKIVWIISSVVAFVLLIGIISFTWIYQIAMGQKEQGHETAIERAKKQAD     50

BSNT_03335___     51 LANVDQVETFVGKEKYYVVKGTDKKGTALYVWVPADKKAKILSKEAKEGI    100
                     :..|:||||||||||.::|:|.:|:....||||||.||.|:::|.||:|:
BPUM_1969___y     51 IVQVEQVETFVGKEKQFIVEGKNKQNETTYVWVPASKKEKVIAKRAKDGV    100

BSNT_03335___    101 SEDKAAKIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYSLSYVDF    150
                     :.::|.:.::.|..|||.|:|.|||||:|||||||||::..|||.|||||
BPUM_1969___y    101 TSNQAVQAVQKENTVSKLKDVQLAREGDVLLWEVTYLNENNQYSFSYVDF    150

BSNT_03335___    151 TTGKILKNITP    161
                     :||.:.||:||
BPUM_1969___y    151 STGHVEKNVTP    161


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