Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03328 and BPUM_1965

See DNA alignment / Visit BSNT_03328 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_03328.1.24716.seq
#    -bsequence pep-align/BPUM_1965___ypoC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03328-BPUM_1965___ypoC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03328-BPUM_1965___ypoC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03328
# 2: BPUM_1965___ypoC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity:      67/169 (39.6%)
# Similarity:   109/169 (64.5%)
# Gaps:          30/169 (17.8%)
# Score: 418.0
# 
#
#=======================================

BSNT_03328         1 ------------------------MKKTLQTNPVYFDFCTE-LQGDLPWE     25
                                             ....|:.:|:.:|..:| |..:|||:
BPUM_1965___y      1 MSGVVVFSSYVEKLKGKKIELKGERMDILREHPLAYDLSSERLTDELPWQ     50

BSNT_03328        26 DSGKYVPLLFEVWDDIKASLLPVFQTRKSRCDQNEMLKGIVCLLASLHWT     75
                     .:.::||::||:|:::|..:||.|:||||||::::||:|||.::|..:|.
BPUM_1965___y     51 KTEEFVPVMFELWNELKEKMLPRFETRKSRCEEDDMLQGIVSMIAVFYWI    100

BSNT_03328        76 AGEPVKSLDWQELREKSYPAKPINWAERVEFILLKPTQYHCFIQLDELIT    125
                     .||.:::|:|:.::::::|..||||.||:|||||||||||||||||||.|
BPUM_1965___y    101 KGERIQTLEWEHIKQETFPVAPINWTERLEFILLKPTQYHCFIQLDELYT    150

BSNT_03328       126 EMKKHFYKYHAMNR-----    139
                     |:||.:.||.|:.:     
BPUM_1965___y    151 ELKKQYGKYEALKKIRQKR    169


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