Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03323 and BPUM_1963
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:49
# Commandline: needle
# -asequence pep-align/BSNT_03323___recU.1.24716.seq
# -bsequence pep-align/BPUM_1963___recU.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03323___recU-BPUM_1963___recU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03323___recU-BPUM_1963___recU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03323___recU
# 2: BPUM_1963___recU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 145/206 (70.4%)
# Similarity: 169/206 (82.0%)
# Gaps: 1/206 ( 0.5%)
# Score: 772.0
#
#
#=======================================
BSNT_03323___ 1 MIRYPNGKTFQPKHSVSSQNSQKRAPSYSNRGMTLEDDLNETNKYYLTNQ 50
||||||||::||...:.::.......||||||||||.||||||:|||.|.
BPUM_1963___r 1 MIRYPNGKSYQPIQPIGTKKRISGESSYSNRGMTLEADLNETNQYYLVNG 50
BSNT_03323___ 51 IAVIHKKPTPVQIVNVHYPKRSAAVIKEAYFKQSSTTDYNGIYKGRYIDF 100
||||||||||||||||.||||||||||||||||||||||||:|:||||||
BPUM_1963___r 51 IAVIHKKPTPVQIVNVDYPKRSAAVIKEAYFKQSSTTDYNGVYRGRYIDF 100
BSNT_03323___ 101 EAKETKNKTSFPLQNFHDHQIEHMKQVKAQDGICFVIISAFDQVYFLEAD 150
||||||:.|||||:|||:|||||||||:.|.||||||||||..||:|.|.
BPUM_1963___r 101 EAKETKSTTSFPLKNFHEHQIEHMKQVEKQGGICFVIISAFGSVYYLPAS 150
BSNT_03323___ 151 KLFYFWDRKEKNGRKSIRKDELEETAYPIFLGYAPRIDYISIIEQLYFSP 200
.||:||:|::.||||||.||||.|..:.:.|||:||||||.::|.|:||.
BPUM_1963___r 151 DLFFFWERQKLNGRKSISKDELMEAGHLMTLGYSPRIDYIKVVETLHFSD 200
BSNT_03323___ 201 SSGAKG 206
.|..:
BPUM_1963___r 201 ESEYQ- 205
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