Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03317 and BPUM_1959

See DNA alignment / Visit BSNT_03317 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence pep-align/BSNT_03317___yppE.1.24716.seq
#    -bsequence pep-align/BPUM_1959___yppE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03317___yppE-BPUM_1959___yppE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03317___yppE-BPUM_1959___yppE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03317___yppE
# 2: BPUM_1959___yppE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      51/125 (40.8%)
# Similarity:    76/125 (60.8%)
# Gaps:           4/125 ( 3.2%)
# Score: 239.5
# 
#
#=======================================

BSNT_03317___      1 MLSQTLLEMTEQMIEVAEKGADRYQEGKNSNH--SYDFFETIKPAVEEND     48
                     |.:|||||.|:.:....|:..::||:||....  .|||...|:||||..|
BPUM_1959___y      1 MDNQTLLEHTQNLRIWIEEAYEQYQKGKAEEEYPVYDFHTDIQPAVETFD     50

BSNT_03317___     49 ELAARWAEGALELIKVRRPKYVHKEQIEAVKDNFLELVLQSYVHHIHKKR     98
                     :....|...|:..|.:.:|:|:|:||:||||:|..|:|||||....|..|
BPUM_1959___y     51 QKMKEWLTAAISFIHLAKPRYLHEEQLEAVKENGKEVVLQSYFGKQHAPR    100

BSNT_03317___     99 FKDITESVLYTLHAVKDEIAREDSR    123
                     .|::.|||:|||:.:.:||.:..  
BPUM_1959___y    101 VKNLVESVIYTLNLLIEEINKRS--    123


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