Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03311 and BPUM_1956
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence pep-align/BSNT_03311___ypqE.1.24716.seq
# -bsequence pep-align/BPUM_1956___ypqE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03311___ypqE-BPUM_1956___ypqE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03311___ypqE-BPUM_1956___ypqE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03311___ypqE
# 2: BPUM_1956___ypqE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 118/185 (63.8%)
# Similarity: 142/185 (76.8%)
# Gaps: 17/185 ( 9.2%)
# Score: 635.0
#
#
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BSNT_03311___ 1 MVNEGITVEVNEKGENTLLKKLFGMGKTQEKVTEEVIYSPADGTVMDLSD 50
:||||||.||.|:.|.||:|||||||.:||::|
BPUM_1956___y 1 -----------------MLKKLFGFGKNQDDVKEEIIYSPADGELMDMTD 33
BSNT_03311___ 51 VPDPVFSQKMMGEGIAVEPSSGEIVSPAEGEVIQIFHTKHAVGIRTRSGI 100
||||||||||||:|:||:|:||.||||.|||:||:||||||:||||.||:
BPUM_1956___y 34 VPDPVFSQKMMGDGVAVKPNSGTIVSPVEGEIIQLFHTKHAIGIRTLSGL 83
BSNT_03311___ 101 ELLIHVGLETVNMNGEGFTAHIKEGDKVKVGDPLITCDLELIKEKASSTV 150
|||||:|||||.:|||||.||||||||||:||||||||||||:|||:|||
BPUM_1956___y 84 ELLIHIGLETVGLNGEGFEAHIKEGDKVKIGDPLITCDLELIEEKAASTV 133
BSNT_03311___ 151 IPIVIMNGEAVGSMVPAGEKAARKGESKLLTIKAK 185
.|||||||:.:..:....:....|..|||.|:|.|
BPUM_1956___y 134 TPIVIMNGDLIEQLDKEPKGTVEKQTSKLFTVKLK 168
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