Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03306 and BPUM_1953
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:48
# Commandline: needle
# -asequence pep-align/BSNT_03306___yprB.1.24716.seq
# -bsequence pep-align/BPUM_1953___yprB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03306___yprB-BPUM_1953___yprB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03306___yprB-BPUM_1953___yprB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03306___yprB
# 2: BPUM_1953___yprB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity: 250/417 (60.0%)
# Similarity: 313/417 (75.1%)
# Gaps: 6/417 ( 1.4%)
# Score: 1299.0
#
#
#=======================================
BSNT_03306___ 1 MSLKGKLQRMKKHMALD---EGEQKIEAGK-QENHFDDIPFLEEWEAFGM 46
|||||||.|||||::.: |..||...|: |....::||||:||||.|:
BPUM_1953___y 1 MSLKGKLNRMKKHLSHNQPQENRQKTSEGQPQPVTSENIPFLKEWEALGV 50
BSNT_03306___ 47 KPFIFEDEYCLIREVEYPLSHRHGLYSFSELEEVITLWNQSGLSHTLSAK 96
.|:.|||.:||||||.|.|..:||.|||:||.:||..||:||:.|:||||
BPUM_1953___y 51 SPYHFEDSFCLIREVTYSLDDQHGRYSFAELPKVIEQWNESGIQHSLSAK 100
BSNT_03306___ 97 GYNKNNLFFFDTETTGLGGGAGNTIFLLGHARVYEDRVTVKQHLLPKPGN 146
||..:.|||||||||||.||.||.|||||||||:.|:|.||||||..|||
BPUM_1953___y 101 GYEPHELFFFDTETTGLSGGTGNMIFLLGHARVFSDKVVVKQHLLTNPGN 150
BSNT_03306___ 147 EVALYQSFLSEVDITSLVTYNGKAFDWPQVKTRHTLIRDRLPKLPEFGHF 196
|||||:|||.||::.||||||||:||||||||||||:||::|.|||||||
BPUM_1953___y 151 EVALYKSFLDEVNVESLVTYNGKSFDWPQVKTRHTLLRDQIPALPEFGHF 200
BSNT_03306___ 197 DLLHGARRLWKHKMDRVSLGTVEKEELGIRRLEDTPGYLAPMLYFHFIKA 246
|||||:|||||||.:|::|..||||||.::|..||||:||||:||||:|.
BPUM_1953___y 201 DLLHGSRRLWKHKYERMALSVVEKEELHVQRENDTPGFLAPMIYFHFLKE 250
BSNT_03306___ 247 QEPDLLKGVLHHNEMDVLSLISLYIHMSKKILSESHAPKEHSEAYAMAKW 296
|.|.|::|:|.|||:|||||||||||:||||||.. |.|||:|.||:|:|
BPUM_1953___y 251 QNPKLIEGILTHNELDVLSLISLYIHLSKKILSVD-AVKEHNEKYALARW 299
BSNT_03306___ 297 FMAHKETDQAMKQLERLIEKSFEDQDSARLDLSLLYKKQNRLEEAVPLWE 346
.:||::..:|.|.|:.|....||..|.|..||||.||:|.:.::||.:|.
BPUM_1953___y 300 HLAHRDVQEATKHLQELTNADFEHADQASYDLSLQYKRQKKWKQAVQIWG 349
BSNT_03306___ 347 KLSRSQNQKCRYAAVIELAKYFEHKKKKFGKALQIAEQLLSDAACLSEKE 396
:|..|.:......|.||||||.||::|....||.:.|.|||.:: ||::|
BPUM_1953___y 350 ELFASSDVHLALKAGIELAKYKEHREKDTRSALSVTESLLSFSS-LSQRE 398
BSNT_03306___ 397 TEKLHVRIARLKRKYSS 413
||:|..|..||.||...
BPUM_1953___y 399 TEELEKRKKRLLRKAGQ 415
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