Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03302 and BPUM_1951

See DNA alignment / Visit BSNT_03302 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:48
# Commandline: needle
#    -asequence pep-align/BSNT_03302___ypsB.1.24716.seq
#    -bsequence pep-align/BPUM_1951___ypsB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03302___ypsB-BPUM_1951___ypsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03302___ypsB-BPUM_1951___ypsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03302___ypsB
# 2: BPUM_1951___ypsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 101
# Identity:      89/101 (88.1%)
# Similarity:    94/101 (93.1%)
# Gaps:           3/101 ( 3.0%)
# Score: 445.0
# 
#
#=======================================

BSNT_03302___      1 MLADKVKLSAKEILEKEFKTGVRGYKQEDVDKFLDMIIKDYETFHQEIEE     50
                     ||||||||||||||||||||||||||||:|||||||:|||||||:||||:
BPUM_1951___y      1 MLADKVKLSAKEILEKEFKTGVRGYKQEEVDKFLDMVIKDYETFNQEIEK     50

BSNT_03302___     51 LQQENLQLKKQLEEA---SKKQPVQSNTTNFDILKRLSNLEKHVFGSKLY     97
                     ||||||.|.||||||   .|:||.||||||||||||||||||||||||||
BPUM_1951___y     51 LQQENLHLSKQLEEAVEQGKRQPAQSNTTNFDILKRLSNLEKHVFGSKLY    100

BSNT_03302___     98 D     98
                     |
BPUM_1951___y    101 D    101


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