Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03299 and BPUM_1946
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_03299___ypvA.1.24716.seq
# -bsequence pep-align/BPUM_1946___ypvA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03299___ypvA-BPUM_1946___ypvA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03299___ypvA-BPUM_1946___ypvA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03299___ypvA
# 2: BPUM_1946___ypvA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 646
# Identity: 488/646 (75.5%)
# Similarity: 557/646 (86.2%)
# Gaps: 6/646 ( 0.9%)
# Score: 2554.0
#
#
#=======================================
BSNT_03299___ 1 MTTSRLPFSLTKTKNFYEELNNWIGDVFYDILPEKGFDLRDEQVFMAFQL 50
||.|||||||:|..||||||.||||||||||||||||||||||:||||||
BPUM_1946___y 1 MTASRLPFSLSKEHNFYEELGNWIGDVFYDILPEKGFDLRDEQIFMAFQL 50
BSNT_03299___ 51 ERAFKEKKVMFAEAGVGTGKTLVYLLFAISYARYVGKPAIIACADETLIE 100
|||||||.|||||||||||||:||||||::||||.|||||||||||||||
BPUM_1946___y 51 ERAFKEKSVMFAEAGVGTGKTIVYLLFAVTYARYTGKPAIIACADETLIE 100
BSNT_03299___ 101 QLVKKEGDISKLAEHLDLKIDTRLSKSHEQYLCLKKLEKTMQRSDDDKWL 150
||||:||||.|:|.|||::||.||||||:||||||||||||||.||:|||
BPUM_1946___y 101 QLVKQEGDIYKIANHLDIQIDARLSKSHDQYLCLKKLEKTMQREDDEKWL 150
BSNT_03299___ 151 DLYESLPSFVHESQAMQRFYPYGDRKQYANLSNEEWSDVSYDSFQDCLTC 200
|:|||||||||||..||.||||||||:|..|||:|||.:.||||||||||
BPUM_1946___y 151 DIYESLPSFVHESHGMQNFYPYGDRKEYPELSNDEWSRIGYDSFQDCLTC 200
BSNT_03299___ 201 DMRHRCGLTLSRDYYRKSTDLIICSHDFYMEHVWTEESRKREGQLPLLPD 250
||||||||.||||:|||:|||||||||||||||||:|||||||||||||:
BPUM_1946___y 201 DMRHRCGLNLSRDHYRKATDLIICSHDFYMEHVWTKESRKREGQLPLLPE 250
BSNT_03299___ 251 HSAVVFDEGHLLEFAAQKALTYRVKQSTLELFLERLLQNDIREEFAELIE 300
||:||||||||||||||||||||||||.||.||||||.||||||||||:|
BPUM_1946___y 251 HSSVVFDEGHLLEFAAQKALTYRVKQSMLETFLERLLHNDIREEFAELVE 300
BSNT_03299___ 301 DALLANDEFFYVLSEESKEVAGSHRLEIKNDQRVKKAADELCRLLDKIGE 350
|||..||||||:|...:||:.|||||||.....||::|.|||.||:||||
BPUM_1946___y 301 DALATNDEFFYLLKTHAKEIKGSHRLEIGRVDEVKRSASELCDLLEKIGE 350
BSNT_03299___ 351 ALVFESEMYTIDQYELSVVEEYVEQMAYSLSLYQKDAISWLEKKEAESTF 400
||||||||||||||||||||||:||||||||||||:|||||||:|.::||
BPUM_1946___y 351 ALVFESEMYTIDQYELSVVEEYIEQMAYSLSLYQKNAISWLEKQELDTTF 400
BSNT_03299___ 401 VVMPRTVAEVLGEKVFSKKIPYIFSSATLSEGGSFDYIADSLGIHDYLSL 450
||||:||||||||||||:|.|||||||||||..||||:|:||||.||||:
BPUM_1946___y 401 VVMPKTVAEVLGEKVFSQKRPYIFSSATLSENQSFDYLAESLGIKDYLSM 450
BSNT_03299___ 451 TVDSPYDYDEQMSINLYAKTDM-AAEQKTAETIETIKRYKGRTLVLFPSF 499
:|.|||||||||.|..:....: ..|.|..:.|..:|...||:|:|||||
BPUM_1946___y 451 SVASPYDYDEQMKIYFHGIQQLQEQEAKGQQVITQLKDNGGRSLILFPSF 500
BSNT_03299___ 500 EELNEF-KELSAAWE-LPYPIFFEGDEEISSLVEKFQEEEETVLCSVHLW 547
:||:.| |:|.|:.| ||:.::||||||||::|:|||.:|.:||||||||
BPUM_1946___y 501 DELHFFRKQLEASNESLPFDVYFEGDEEISTIVQKFQADETSVLCSVHLW 550
BSNT_03299___ 548 EGLDIPGDALKNVTIWSLPFPPHDPVFTAKRNGAKKDPFEEVDLPYMLLR 597
|||||||.:|.||.||.||:|||||||.||||.| ||...||||||||||
BPUM_1946___y 551 EGLDIPGQSLTNVVIWGLPYPPHDPVFEAKRNEA-KDARAEVDLPYMLLR 599
BSNT_03299___ 598 VRQGIGRLIRSNQDSGSIHIYAG-GENERIIDEVKKVLPVEPHMM- 641
:|||||||||::||:|:||||.. .||..:..:::.||||:|.:.
BPUM_1946___y 600 LRQGIGRLIRTSQDAGTIHIYFDHKENAELQSKIESVLPVKPIITS 645
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