Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03289 and BPUM_1944
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence pep-align/BSNT_03289___xpt.1.24716.seq
# -bsequence pep-align/BPUM_1944___xpt.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03289___xpt-BPUM_1944___xpt.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03289___xpt-BPUM_1944___xpt.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03289___xpt
# 2: BPUM_1944___xpt
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 147/194 (75.8%)
# Similarity: 168/194 (86.6%)
# Gaps: 0/194 ( 0.0%)
# Score: 729.0
#
#
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BSNT_03289___ 1 MEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRVGDEFASRFAKDG 50
||.|::|||.||:|||:||||||:||||||||:||..:|.|||..|..||
BPUM_1944___x 1 MELLRQKIENEGIVLSNQVLKVDAFLNHQIDPVLMHEIGQEFAKLFKHDG 50
BSNT_03289___ 51 ITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFT 100
||||:||||||||||||.||.|.||||||||.:|||||:|||||||||||
BPUM_1944___x 51 ITKIITIESSGIAPAVMAGLALQVPVVFARKRQSLTLTENLLTASVYSFT 100
BSNT_03289___ 101 KQTESQIAVSRTHLSEQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGI 150
|:.||.||||.|||.|:|.|||||||||||:||.||.:|.|||.|.:||.
BPUM_1944___x 101 KKVESTIAVSNTHLGEKDCVLIIDDFLANGEAAKGLAAIAKQAKAKVAGF 150
BSNT_03289___ 151 GIVIEKSFQPGREELVKLGYRVESLARIQSLEEGKVSFVQEVHS 194
||||||||||||:.||::||||||||||:|||||||:||:||.|
BPUM_1944___x 151 GIVIEKSFQPGRDALVQMGYRVESLARIESLEEGKVTFVREVQS 194
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