Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03289 and BPUM_1944
See
Amino acid alignment /
Visit
BSNT_03289 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:47
# Commandline: needle
# -asequence dna-align/BSNT_03289___xpt.1.24716.seq
# -bsequence dna-align/BPUM_1944___xpt.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03289___xpt-BPUM_1944___xpt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03289___xpt-BPUM_1944___xpt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03289___xpt
# 2: BPUM_1944___xpt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 611
# Identity: 415/611 (67.9%)
# Similarity: 415/611 (67.9%)
# Gaps: 52/611 ( 8.5%)
# Score: 1302.0
#
#
#=======================================
BSNT_03289___ 1 ATGGAAGCACTGAAACG---GAAAATAGAGGAAGAAGGCGTCGTATTATC 47
||||| |.||..||| .|||||.|||.|.|||||..|||| ||
BPUM_1944___x 1 ATGGA---ATTGTTACGTCAAAAAATTGAGAACGAAGGAATCGT----TC 43
BSNT_03289___ 48 TG----ATCAGGTATTGAAAGTGGATTCTTTTTTGAATCACCAAATTGAT 93
|| ||||.||.||.||.||.|||.|.|||||.|||||.|||||||||
BPUM_1944___x 44 TGTCAAATCAAGTGTTAAAGGTAGATGCCTTTTTAAATCATCAAATTGAT 93
BSNT_03289___ 94 CCGCTG-CTT-ATGCA-GAGAGTTGGTGACGAATTTGCGTCCAGATT-TG 139
| ||| ||| ||||| || |.|.||..|.||.|||| |.|.||| |.
BPUM_1944___x 94 C--CTGTCTTAATGCATGA-AATCGGGCAAGAGTTTG---CTAAATTATT 137
BSNT_03289___ 140 CAA--AAGACGGTATTACCAAAATTGTGACAATCGAATCATCAGGTATTG 187
||| |.||.||.|||||.||||||.|.||||||||.||.||||||||||
BPUM_1944___x 138 CAAGCATGATGGCATTACAAAAATTATCACAATCGAGTCTTCAGGTATTG 187
BSNT_03289___ 188 CTCCCGCTGTAATGACGGG-------CTTGAAGCTGGGTGTGCCAGTTGT 230
|.||.|||||.|||.|.|| |||.|| ||.||.|||||
BPUM_1944___x 188 CACCTGCTGTGATGGCTGGACTAGCTCTTCAA-------GTACCCGTTGT 230
BSNT_03289___ 231 CTTCGCGAGAAAGCATAAATCGTTAACACTCACCGACAACTTGCTGACAG 280
.||.||..||||.|.|.||||..|||||||.||.||.|||.|..|.||||
BPUM_1944___x 231 TTTTGCTCGAAAACGTCAATCACTAACACTAACAGAAAACCTATTAACAG 280
BSNT_03289___ 281 CGTCTGTTTATTCCTTTACGAAGCAAACAGAAAGCCAAATCGCAGTGTCT 330
||..|||.||.||.|||||.||..||..||||||....|||||.||.||.
BPUM_1944___x 281 CGAGTGTGTACTCTTTTACAAAAAAAGTAGAAAGTACGATCGCTGTCTCA 330
BSNT_03289___ 331 AGGACCCACCTGTCG--GAACAGGATCATGTGCTGATTATCGATGATTTT 378
|..||.|| |.||| |||.|.|||..|||..|.||.||||||||.||.
BPUM_1944___x 331 AATACGCA--TCTCGGTGAAAAAGATTGTGTATTAATCATCGATGACTTC 378
BSNT_03289___ 379 TTGGCAAATGGACAGGCAGCGCACGGGCTTGTGTCGATTGTGAAGCAAGC 428
|||||.||.||..|.||.||..|.||.||||...|.||.|..|||||.||
BPUM_1944___x 379 TTGGCGAACGGTGAAGCCGCTAAAGGACTTGCCGCAATAGCAAAGCAGGC 428
BSNT_03289___ 429 GGGAGCTTCTA----TTGCGGGAATTGGCATTGTTATTGAAAAGTCATTT 474
|..||| | |.||||||.||||.|||||.||||||||||||||.
BPUM_1944___x 429 GAAAGC----AAAAGTAGCGGGATTTGGTATTGTCATTGAAAAGTCATTC 474
BSNT_03289___ 475 CAGCCGGGAAGAGAAGAACTTGTGAAACTGGGCTACCGAGTGGAATCTTT 524
|||||.||||||||.|..|||||..||.||||||||||.||.|||||..|
BPUM_1944___x 475 CAGCCAGGAAGAGATGCGCTTGTTCAAATGGGCTACCGCGTCGAATCCCT 524
BSNT_03289___ 525 GGCAAGAATTCAGTCTTTAGAAGAAGGAAAAGTGTCCTTCGTACAGGAGG 574
.|||.|.|||.|.||..|.||.|||||.|||||..|.||.||||..||||
BPUM_1944___x 525 TGCACGTATTGAATCACTTGAGGAAGGGAAAGTCACGTTTGTACGAGAGG 574
BSNT_03289___ 575 TTCATTCATGA 585
|.||.||||||
BPUM_1944___x 575 TACAATCATGA 585
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.