Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03288 and BPUM_1943
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence pep-align/BSNT_03288___pbuX.1.24716.seq
# -bsequence pep-align/BPUM_1943___pbuX.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03288___pbuX-BPUM_1943___pbuX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03288___pbuX-BPUM_1943___pbuX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03288___pbuX
# 2: BPUM_1943___pbuX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 333/440 (75.7%)
# Similarity: 385/440 (87.5%)
# Gaps: 3/440 ( 0.7%)
# Score: 1699.0
#
#
#=======================================
BSNT_03288___ 1 -MRNGFGKTLSLGIQHVLAMYAGAIVVPLIVGKAMGLTVEQLTYLVSIDI 49
......|||||||||||||||||::||||||.|:|||..|||||:|.||
BPUM_1943___p 1 MSAAKKAKTLSLGIQHVLAMYAGAVLVPLIVGDALGLTPAQLTYLISADI 50
BSNT_03288___ 50 FMCGVATLLQVWSNRFFGIGLPVVLGCTFTAVSPMIAIGSEYGVSTVYGS 99
||||.|||||:|.|||||||||||||||||||||||||||:||:|::|||
BPUM_1943___p 51 FMCGAATLLQLWKNRFFGIGLPVVLGCTFTAVSPMIAIGSKYGISSIYGS 100
BSNT_03288___ 100 IIASGILVILISFFFGKLVSFFPPVVTGSVVTIIGITLMPVAMNNMAGGE 149
|||||.::||:||||||||.||||||||||||||||||:|||||||||||
BPUM_1943___p 101 IIASGCIIILLSFFFGKLVKFFPPVVTGSVVTIIGITLIPVAMNNMAGGE 150
BSNT_03288___ 150 GSADFGDLSNLVLAFTVLSIIVLLYRFTKGFIKSVSILIGILIGTFIAYF 199
||||:|...||.|||.||.|||||||||.||:|:::||||||:||.:|.|
BPUM_1943___p 151 GSADYGSFENLGLAFLVLFIIVLLYRFTTGFMKAIAILIGILLGTAVAAF 200
BSNT_03288___ 200 MGKVQFDNVSDAAVVQMIQPFYFGAPSFHAAPIITMSIVAIVSLVESTGV 249
||||:...|::|.|.:||:|||||.|:|..|||:||::||||||||||||
BPUM_1943___p 201 MGKVETAEVANAQVFRMIEPFYFGMPTFEFAPIMTMTLVAIVSLVESTGV 250
BSNT_03288___ 250 YFALGDLTNRRLTEKDLSKGYRAEGLAVLLGGIFNAFPYTAFSQNVGLVQ 299
||||||||||.|.||||:|||||||:|||||||||||||||:||||||:|
BPUM_1943___p 251 YFALGDLTNRSLNEKDLAKGYRAEGIAVLLGGIFNAFPYTAYSQNVGLIQ 300
BSNT_03288___ 300 LTGIKKNTVIVVTGVILMAFGLFPKIAAFTTIIPSAVLGGAMVAMFGMVI 349
|||:|||.||||||.:||.|||||||||||||||.:||||||||||||||
BPUM_1943___p 301 LTGVKKNQVIVVTGALLMLFGLFPKIAAFTTIIPKSVLGGAMVAMFGMVI 350
BSNT_03288___ 350 AYGIKMLSRIDFAKQENLLIVACSVGLGLGVTVVPDIFKQLPSALTLLTT 399
|||||||||:||||||||||||||||:||||||||.:|..||.::.|||:
BPUM_1943___p 351 AYGIKMLSRVDFAKQENLLIVACSVGIGLGVTVVPQMFDHLPESIKLLTS 400
BSNT_03288___ 400 NGIVAGSFTAVVLNIVYNVFSKAKKSEQEADLAEQKTAV- 438
||||||||||::|:|:|::....|:..|:. :.|.|.:|
BPUM_1943___p 401 NGIVAGSFTAILLHIIYHMIPFKKEGGQDL-MEEPKQSVM 439
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