Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03286 and BPUM_1940

See DNA alignment / Visit BSNT_03286 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_03286___ypbQ.1.24716.seq
#    -bsequence pep-align/BPUM_1940___ypbQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03286___ypbQ-BPUM_1940___ypbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03286___ypbQ-BPUM_1940___ypbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03286___ypbQ
# 2: BPUM_1940___ypbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 169
# Identity:      96/169 (56.8%)
# Similarity:   127/169 (75.1%)
# Gaps:           1/169 ( 0.6%)
# Score: 539.0
# 
#
#=======================================

BSNT_03286___      1 -MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHIL     49
                      :.||:|...:.||..||.||::||:|||..||||||.|||||::.||..
BPUM_1940___y      1 MIVWLVIGFFVCQRLIEMLVAKRNEKKVKAIGAIEFGASHYPYMVAMHTA     50

BSNT_03286___     50 FFLSLIAEVLLMNKQPSSWWLGIAAVILSAQIVRYWALCSLGAYWNTKIL     99
                     ||||||.|:.|::|.||.::|.:...:::.||:|||||||||.|||||||
BPUM_1940___y     51 FFLSLIVEIKLLHKGPSQYFLVLLLFLMATQIIRYWALCSLGTYWNTKIL    100

BSNT_03286___    100 VVPGVELVKKGPYKWMKHPNYAVVILEILLIPLLYQAYVTMCLFSIFNAV    149
                     |||...:||||||:|:|||||.||.:|:|.||||:.||||..||:..||.
BPUM_1940___y    101 VVPNAMIVKKGPYRWLKHPNYVVVAIELLFIPLLFDAYVTAILFTCLNAW    150

BSNT_03286___    150 LLSVRIRAEDKALQEYSVK    168
                     ::.|||:.|:|||.:|.:.
BPUM_1940___y    151 MMVVRIQTEEKALNQYLLN    169


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.