Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03282 and BPUM_1938

See DNA alignment / Visit BSNT_03282 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03282___ypbS.1.24716.seq
#    -bsequence pep-align/BPUM_1938___ypbS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03282___ypbS-BPUM_1938___ypbS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03282___ypbS-BPUM_1938___ypbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03282___ypbS
# 2: BPUM_1938___ypbS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 87
# Identity:      51/87 (58.6%)
# Similarity:    64/87 (73.6%)
# Gaps:           2/87 ( 2.3%)
# Score: 267.0
# 
#
#=======================================

BSNT_03282___      1 MSEVHKAISAHSSKQHEHIKAFMRLENMRELAIEEVVAKCRNDEPYTTDA     50
                     |:.||:.|||||.|||.||::|:.||..||.|||..|.||..:||:|||.
BPUM_1938___y      1 MTSVHEEISAHSQKQHAHIQSFLELEQKREQAIEMAVFKCEQNEPFTTDE     50

BSNT_03282___     51 INEITEQMNQLAKKGIVPTRRLVSKEMVREYVSRM--     85
                     ||.||.:||:||:.||||.|:||:.:||||||.|.  
BPUM_1938___y     51 INAITSKMNELARGGIVPLRKLVTNDMVREYVERKQK     87


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