Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03280 and BPUM_1937

See DNA alignment / Visit BSNT_03280 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03280___ypcP.1.24716.seq
#    -bsequence pep-align/BPUM_1937___ypcP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03280___ypcP-BPUM_1937___ypcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03280___ypcP-BPUM_1937___ypcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03280___ypcP
# 2: BPUM_1937___ypcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     206/296 (69.6%)
# Similarity:   244/296 (82.4%)
# Gaps:           1/296 ( 0.3%)
# Score: 1085.0
# 
#
#=======================================

BSNT_03280___      1 MNNNKLLLVDGMALLFRAFFATAVHRNFMINDSGVPTNGVNGFLKHLITA     50
                      .:..:|||||||||||:|:||||||||||||.|||||||||:||||:||
BPUM_1937___y      1 -MSKHVLLVDGMALLFRSFYATAVHRNFMINDHGVPTNGVNGYLKHLLTA     49

BSNT_03280___     51 VETFQPTHVVCCWDMGSKTYRNDLFQDYKANRSAPPVELIPQFDLAKEAA    100
                     |:||:|||:|.||||||:||||:|||||||||...||||||||||||||.
BPUM_1937___y     50 VQTFEPTHIVSCWDMGSQTYRNELFQDYKANRGEAPVELIPQFDLAKEAT     99

BSNT_03280___    101 AELGIMNIGFAGYEADDCIGTLADLFANEADITVVTGDRDLLQLLTDKVS    150
                     .||||:|||..|:||||||||||.|:..||.:||:|||:||||:|.::|:
BPUM_1937___y    100 EELGIVNIGLKGFEADDCIGTLAALYQKEARVTVLTGDKDLLQILNEQVT    149

BSNT_03280___    151 VALLQKGIGNYKVYTKETFYEETGVMPKALIDIKALMGDSSDNYPGVKGI    200
                     |||:||||||||.|||..|.||.|:.||||||:||||||:||||||||||
BPUM_1937___y    150 VALMQKGIGNYKHYTKALFEEEMGISPKALIDMKALMGDASDNYPGVKGI    199

BSNT_03280___    201 GEKTAYKLIREYETIDRLLENLSLLPKGQQGKIQQGLSDLEMSRKLAEIH    250
                     |||||.|.|:.|:|||.||||:..|...||.|:|.||.||::||.||||.
BPUM_1937___y    200 GEKTALKFIQTYKTIDGLLENVHKLTAAQQKKMQAGLEDLQLSRLLAEIK    249

BSNT_03280___    251 CSVPLACTLKDALFTLQMEQAADMLRRHQIKGIERMLEKLNAREIV    296
                     |.|||:|.:.:|...:..|:||.|||.|||||||.|:.:||.|||.
BPUM_1937___y    250 CDVPLSCPIDEAKMNINQERAAAMLRHHQIKGIEPMMNRLNIREIS    295


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