Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03277 and BPUM_1935

See DNA alignment / Visit BSNT_03277 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03277___ypdQ.1.24716.seq
#    -bsequence pep-align/BPUM_1935___rnhA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03277___ypdQ-BPUM_1935___rnhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03277___ypdQ-BPUM_1935___rnhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03277___ypdQ
# 2: BPUM_1935___rnhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 132
# Identity:      82/132 (62.1%)
# Similarity:   102/132 (77.3%)
# Gaps:           1/132 ( 0.8%)
# Score: 432.0
# 
#
#=======================================

BSNT_03277___      1 MPTEIYVDGASAGNPGPSGIGIFIKHEGIAESFSIPIGVHTNQEAEFLAL     50
                     ||.|||:||||||||||||||||||:.|.|||||||:|..:|.||||.||
BPUM_1935___r      1 MPAEIYIDGASAGNPGPSGIGIFIKYNGKAESFSIPLGSMSNHEAEFSAL     50

BSNT_03277___     51 IEGMKLCATRGYQSVSFRTDSDIVERATELEMVKNKTFQPFVEEITRLKA    100
                     |||||:|..:|.::|||||||.:|:||......||..||.|::|:..|::
BPUM_1935___r     51 IEGMKICVEKGLRTVSFRTDSQVVDRAANAGFAKNPAFQHFIKEMIELQS    100

BSNT_03277___    101 AFPLFFIKWIPGKQNQKADLLAKEAIRLNEKN    132
                     .|.||||||||.|:||.||.||::||.|::. 
BPUM_1935___r    101 NFDLFFIKWIPSKENQVADQLARKAIHLSKG-    131


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