Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03274 and BPUM_1933
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence pep-align/BSNT_03274___ypeP.1.24716.seq
# -bsequence pep-align/BPUM_1933___ypeP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03274___ypeP-BPUM_1933___ypeP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03274___ypeP-BPUM_1933___ypeP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03274___ypeP
# 2: BPUM_1933___ypeP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 125/226 (55.3%)
# Similarity: 166/226 (73.5%)
# Gaps: 3/226 ( 1.3%)
# Score: 671.0
#
#
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BSNT_03274___ 1 MKLRPHLKIEAKGTGSVSFFSEDWLTAQQARLLARELGRFPYMKELEFED 50
||||.|..::.|..|:::|:.||||..::|..||:.:.:......|.|||
BPUM_1933___y 1 MKLRAHYTMKVKSIGAIAFYQEDWLELKEALRLAKHIDKKEPQSLLSFED 50
BSNT_03274___ 51 EKGGSWMLKELEKLTEELAQEPDDITVYFDGSFDKESELAGLGIVIYYSL 100
|||..|.:||||||.|||..|||::.||||.||.||:..:|||:|:||.|
BPUM_1933___y 51 EKGAMWSIKELEKLNEELKLEPDELQVYFDASFHKETGDSGLGVVVYYKL 100
BSNT_03274___ 101 GGTRHRLRKNKSFRLKTNNEAEYAALYEAIREVRELGASRNSITIKGDSL 150
|...:|||||:.|:..||||||||||:||::.:::|||||||:||:||||
BPUM_1933___y 101 GKDAYRLRKNQPFQGSTNNEAEYAALFEAVKTLKDLGASRNSVTIRGDSL 150
BSNT_03274___ 151 VVLNQLDGSWPCYDPSHNEWLDKIEALLESLKLTPTYETIQRKDNQEADG 200
||:|||.|.|||||..||:|||:|||.|:.||||||||.|.||.|.|||.
BPUM_1933___y 151 VVMNQLKGEWPCYDDVHNKWLDRIEADLKELKLTPTYEAIDRKQNAEADQ 200
BSNT_03274___ 201 LAKKILSHQFVESHTKLDRNGDDDIG 226
||:::|:...:||..||:.:|.:
BPUM_1933___y 201 LARQVLADVPIESTLKLEADGAE--- 223
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