Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03273 and BPUM_1932

See DNA alignment / Visit BSNT_03273 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03273___ypeQ.1.24716.seq
#    -bsequence pep-align/BPUM_1932___ypeQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03273___ypeQ-BPUM_1932___ypeQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03273___ypeQ-BPUM_1932___ypeQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03273___ypeQ
# 2: BPUM_1932___ypeQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      40/60 (66.7%)
# Similarity:    45/60 (75.0%)
# Gaps:           0/60 ( 0.0%)
# Score: 226.0
# 
#
#=======================================

BSNT_03273___      1 MDKKMIFKELTELHDEYCKDCFIKKQFRKEFGKTYAHSFCINKCTVGEKL     50
                     ||||...:|||:|.|.||.||.|||.|||||||.|||||||.:||||||:
BPUM_1932___y      1 MDKKTAVQELTDLQDTYCSDCLIKKHFRKEFGKKYAHSFCIQQCTVGEKI     50

BSNT_03273___     51 KQYGDVLTNH     60
                     |:||..|...
BPUM_1932___y     51 KEYGKTLLKK     60


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