Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03273 and BPUM_1932
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_03273___ypeQ.1.24716.seq
# -bsequence dna-align/BPUM_1932___ypeQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03273___ypeQ-BPUM_1932___ypeQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03273___ypeQ-BPUM_1932___ypeQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03273___ypeQ
# 2: BPUM_1932___ypeQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 132/192 (68.8%)
# Similarity: 132/192 (68.8%)
# Gaps: 18/192 ( 9.4%)
# Score: 426.0
#
#
#=======================================
BSNT_03273___ 1 TTGGATAAGAAAATGATCTTTA-AAGAACTGACAGAATTGCACGATGAAT 49
.||||||| ||||..|.|..|| |||||.||||.||..|.||.||....|
BPUM_1932___y 1 GTGGATAA-AAAAACAGCAGTACAAGAATTGACCGATCTTCAAGACACGT 49
BSNT_03273___ 50 ATTG--CAAGGACTGTTTTATTAAGAAGCAGTTTCGCAAAGAATTTGGCA 97
|||| || ||.|||||.|||||||||||.|||||.|||||||||||||
BPUM_1932___y 50 ATTGTTCA--GATTGTTTGATTAAGAAGCATTTTCGAAAAGAATTTGGCA 97
BSNT_03273___ 98 AAACTTATGCGCATTCATTTTGTATCAATAAATGTACGGTTGGTGAAAAG 147
|||..|||||.|||||.||||||||..|..||||.||.|||||.||.||.
BPUM_1932___y 98 AAAAATATGCCCATTCCTTTTGTATACAGCAATGCACCGTTGGAGAGAAA 147
BSNT_03273___ 148 CTGAAACAATACGGAGATGTCTTAAC------CAATCACTAA 183
.|.|||.||| |||.|..||| |||..|.|||
BPUM_1932___y 148 ATAAAAGAAT------ATGGCAAAACGCTACTCAAAAAATAA 183
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