Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03271 and BPUM_1931

See DNA alignment / Visit BSNT_03271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03271___degR.1.24716.seq
#    -bsequence pep-align/BPUM_1931___degR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03271___degR-BPUM_1931___degR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03271___degR-BPUM_1931___degR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03271___degR
# 2: BPUM_1931___degR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      39/60 (65.0%)
# Similarity:    52/60 (86.7%)
# Gaps:           0/60 ( 0.0%)
# Score: 212.0
# 
#
#=======================================

BSNT_03271___      1 MDDKDLKLILHKTFIEIYSDLEELADIAKKGKPSMEKYVEEIEQRCKQNI     50
                     |::|:.:.:||:||.|:|||||:|.|:||||:|.:||.:.|||||.||||
BPUM_1931___d      1 MNNKEFETVLHRTFQEVYSDLEQLVDVAKKGRPFLEKDISEIEQRLKQNI     50

BSNT_03271___     51 LAIEIQMKIK     60
                     ||||||:|||
BPUM_1931___d     51 LAIEIQLKIK     60


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