Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03271 and BPUM_1931
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_03271___degR.1.24716.seq
# -bsequence dna-align/BPUM_1931___degR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03271___degR-BPUM_1931___degR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03271___degR-BPUM_1931___degR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03271___degR
# 2: BPUM_1931___degR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 131/188 (69.7%)
# Similarity: 131/188 (69.7%)
# Gaps: 10/188 ( 5.3%)
# Score: 405.0
#
#
#=======================================
BSNT_03271___ 1 ATGGATGATAAAGACTT-GAA---GTTGATCCTTCACAAAACATTTATAG 46
|||.||.||||.||.|| ||| || || |.||...|||||||..||
BPUM_1931___d 1 ATGAATAATAAGGAGTTCGAAACGGT--AT--TACATCGAACATTTCAAG 46
BSNT_03271___ 47 AAATATACAGTGATTTAGAAGAACTGGCGGATATCGCGAAAAAAGGAAAA 96
|..|.|||||.|||.||||..||||.|..|||.|.||.||.||.||||.|
BPUM_1931___d 47 AGGTGTACAGCGATCTAGAGCAACTTGTAGATGTAGCAAAGAAGGGAAGA 96
BSNT_03271___ 97 CCATCAATGGAAAAGTATGTTGAAGAGATTGAACAGAGGTGTAAA-CAAA 145
||.|...|.|||||..||.||...||.|||||||| |.|..|||| ||||
BPUM_1931___d 97 CCTTTTCTCGAAAAAGATATTTCTGAAATTGAACA-ACGACTAAAGCAAA 145
BSNT_03271___ 146 ACATTTTGGCGATTGAAATCCAGATGAAAATCAAATAG 183
|.|||||.||.||||||||.|||.|||||||||||||.
BPUM_1931___d 146 ATATTTTAGCAATTGAAATTCAGCTGAAAATCAAATAA 183
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