Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03266 and BPUM_1925

See DNA alignment / Visit BSNT_03266 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03266___bsaA.1.24716.seq
#    -bsequence pep-align/BPUM_1925___bsaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03266___bsaA-BPUM_1925___bsaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03266___bsaA-BPUM_1925___bsaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03266___bsaA
# 2: BPUM_1925___bsaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 160
# Identity:     112/160 (70.0%)
# Similarity:   136/160 (85.0%)
# Gaps:           0/160 ( 0.0%)
# Score: 627.0
# 
#
#=======================================

BSNT_03266___      1 MSIYHMKVRTITGKDMTLQPFAGKVLMIVNTASKCGFTPQLKQLQELYDT     50
                     ||||.::|:||.|::.::..:.||||:|||||||||.|||.||||||||.
BPUM_1925___b      1 MSIYDIQVKTINGQEKSMADYKGKVLIIVNTASKCGLTPQFKQLQELYDQ     50

BSNT_03266___     51 YQQEGLEILGFPCNQFMNQEPDEEADIQEFCETNYGVTFPMFSKVDVNGK    100
                     |.::|||||||||||||||||:.|..|||||..|||||||||:||||||.
BPUM_1925___b     51 YHEKGLEILGFPCNQFMNQEPEGEEAIQEFCSLNYGVTFPMFAKVDVNGD    100

BSNT_03266___    101 NAHPLFVYLTEHAKGMLGTKAIKWNFTKFIVDRNGEIVGRYSPNTNPKEL    150
                     ||||||.:||.||||:||||.:||||||||||:|||:..|:||.|:||||
BPUM_1925___b    101 NAHPLFKHLTSHAKGVLGTKTVKWNFTKFIVDQNGEVTERFSPKTSPKEL    150

BSNT_03266___    151 ENDIVKLLEQ    160
                     |:.|:.||::
BPUM_1925___b    151 ESSIIALLDK    160


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