Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03264 and BPUM_1924

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence pep-align/BSNT_03264___ypgQ.1.24716.seq
#    -bsequence pep-align/BPUM_1924___ypgQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03264___ypgQ-BPUM_1924___ypgQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03264___ypgQ-BPUM_1924___ypgQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03264___ypgQ
# 2: BPUM_1924___ypgQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity:      90/208 (43.3%)
# Similarity:   123/208 (59.1%)
# Gaps:           8/208 ( 3.8%)
# Score: 387.5
# 
#
#=======================================

BSNT_03264___      1 MKELKQAEQIRTWVQSILTDESSGHDWHHVSRVADLAAYIGEKEKADLFI     50
                      .:.||.|...::|...|..|.:|||..|:.||..||.::..:|....|:
BPUM_1924___y      1 -MQKKQLEAAASFVSDRLKYEPTGHDAAHIDRVRQLACHMANQEGGSQFV     49

BSNT_03264___     51 VETAALVHDLIDVKLPDTVRLSVSEVYDQLVFFGVGKDNADRVIHIITRM    100
                     :|.||:|||:||.||....|:|..::..||:.:.|...:...::.|||.|
BPUM_1924___y     50 IEMAAIVHDVIDEKLSSEWRISPKQLELQLLSWEVHTRDIRYIMDIITTM     99

BSNT_03264___    101 SFRDRGKLAKEPLSIEGKAVQDADRLDAIGAVGIARAFMFAGAKGHGLY-    149
                     |||.|.| ...|:|:||..||||||||||||.||||.|.:|||||...| 
BPUM_1924___y    100 SFRHRHK-QNRPISLEGAIVQDADRLDAIGATGIARVFTYAGAKGEPHYT    148

BSNT_03264___    150 GDEQ--SAYAHFFHKLLRLKDMMNTDTARELAEERHNFMLQFVRQLEKEI    197
                     .|.|  |...|...|||:|||:|||.:.::||||||:.|..|::..::|.
BPUM_1924___y    149 KDTQQGSVLKHMEEKLLKLKDLMNTRSGKQLAEERHDLMSLFIKTWKEEC    198

BSNT_03264___    198 PGIDAKTS    205
                     ...|.   
BPUM_1924___y    199 GLTDE---    203


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