Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03256 and BPUM_1920

See DNA alignment / Visit BSNT_03256 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_03256.1.24716.seq
#    -bsequence pep-align/BPUM_1920___ypiP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03256-BPUM_1920___ypiP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03256-BPUM_1920___ypiP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03256
# 2: BPUM_1920___ypiP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     153/264 (58.0%)
# Similarity:   192/264 (72.7%)
# Gaps:           9/264 ( 3.4%)
# Score: 754.5
# 
#
#=======================================

BSNT_03256         1 -MITTSYRPSEHTIKTAKQLSKELNMPYCGRNKQTVEHL-LKSAERDLLV     48
                      :||||:|.:|.||:|||.|:::|:..|..|.||:|:.| ||..  |:||
BPUM_1920___y      1 MLITTSFRANEQTIETAKALAEDLHGEYVERRKQSVKQLALKRG--DVLV     48

BSNT_03256        49 VGKERFELYTKQGAKFFFHPNTAMFRAKRFLQGEQEPMLRAAGLSEGDAF     98
                     |||||||.|...|.||||||::||||.||.|:.|::|::.||.|..||:|
BPUM_1920___y     49 VGKERFEWYQPNGEKFFFHPSSAMFRVKRLLREEKDPLIEAAQLKPGDSF     98

BSNT_03256        99 LDCTLGLGSDAIIASMAVGETGSVVGIEKNHLVSVLVRMGLHSWETGIEE    148
                     |||||||||||:.||.|||..|.:||||||.:.::|||.||::|||||||
BPUM_1920___y     99 LDCTLGLGSDAMTASFAVGRKGKIVGIEKNPITALLVREGLNTWETGIEE    148

BSNT_03256       149 LQAAMRRIQVKNGDCLEYIKQLPDNSVDVVYFDPMFHEPVETSDGIAPLR    198
                     ...||:||.|.:||.:|.:|:.||.|.|||||||||.|.::.|..|||||
BPUM_1920___y    149 ADEAMKRISVISGDSIEQLKKYPDGSFDVVYFDPMFEETIQESTSIAPLR    198

BSNT_03256       199 DLAEDSVLHEGCINEAVRVARKSVVLKDHWKSPRF--EQFGFNVMKRKTA    246
                     ..||....||..:.||:|||||.|||||||||.||  :.:.|.|:|||||
BPUM_1920___y    199 HAAEHDFDHEAAVLEALRVARKRVVLKDHWKSTRFKADSYQFQVIKRKTA    248

BSNT_03256       247 LFHYGVI--QTSP-    257
                     .||||.|  :.|| 
BPUM_1920___y    249 QFHYGYIEKEKSPY    262


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