Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03255 and BPUM_1918
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_03255___ypjP.1.24716.seq
# -bsequence pep-align/BPUM_1918___ypjP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03255___ypjP-BPUM_1918___ypjP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03255___ypjP-BPUM_1918___ypjP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03255___ypjP
# 2: BPUM_1918___ypjP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 135/209 (64.6%)
# Similarity: 164/209 (78.5%)
# Gaps: 12/209 ( 5.7%)
# Score: 735.5
#
#
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BSNT_03255___ 1 --MWMRKTLVVLFTIVTFGLVSPPAALMADKPSGQPSSLEQNDYTAFYDE 48
||||||||.||||.||||||||:|||.|||| :.||.::..|||.||.
BPUM_1918___y 1 MKMWMRKTLVALFTIATFGLVSPPSALMTDKPS-ELSSPDKTPYTAVYDS 49
BSNT_03255___ 49 HD------LYDDESDDRRDPELLFQSYKEQLLDSAEDQSFLKFGSRIAPV 92
.| ...:.|:::.|| |:.|||::|.|||:|||||||.:|.||
BPUM_1918___y 50 SDELRSWERSQEASEEQVDP---FEQYKEEVLSSAENQSFLKFGRKITPV 96
BSNT_03255___ 93 IEDDYRKEILPKIEKVISDYLATLQDDEAYQDVVISSMPSAGKTEKIFNV 142
|||:||:||.||||:|::|.|...:|||.:||||::..||:|..||||::
BPUM_1918___y 97 IEDEYREEIQPKIEQVLTDVLTNFKDDEKFQDVVLTDQPSSGNGEKIFHI 146
BSNT_03255___ 143 YNRTTGEDLLRFHVRRDHPPHDGYWFNFHYHTAEDGFQSHHELGSIYWDR 192
|||.|||||||||||||.|||.||||||||||||||||:|||||:||||:
BPUM_1918___y 147 YNRKTGEDLLRFHVRRDQPPHSGYWFNFHYHTAEDGFQTHHELGNIYWDK 196
BSNT_03255___ 193 NTPPNWMSA 201
||||:|||.
BPUM_1918___y 197 NTPPSWMSH 205
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