Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03254 and BPUM_1917
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_03254___ypjQ.1.24716.seq
# -bsequence pep-align/BPUM_1917.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03254___ypjQ-BPUM_1917.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03254___ypjQ-BPUM_1917.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03254___ypjQ
# 2: BPUM_1917
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 145/182 (79.7%)
# Similarity: 161/182 (88.5%)
# Gaps: 8/182 ( 4.4%)
# Score: 739.0
#
#
#=======================================
BSNT_03254___ 1 ----MKKYTMNEMVDITKDMLNKRGVMIEDIARIVQKLQEKYNPNLPLSV 46
:|||||||||.|||.|||:|||.|||||.||.||||||:|||||||
BPUM_1917 1 MSCQLKKYTMNEMVQITKQMLNERGVKIEDIAHIVLKLQEKYHPNLPLSV 50
BSNT_03254___ 47 CMENVEKVLNKREIIHAVLTGLALDQLAEQKFLPEPLQHLVETDEPLYGI 96
|:||||||||||||:||||||||||||||:|.||||||||||||||||||
BPUM_1917 51 CIENVEKVLNKREIVHAVLTGLALDQLAEKKLLPEPLQHLVETDEPLYGI 100
BSNT_03254___ 97 DEIIPLSIVNVYGSIGLTNFGYLDKEKIGIIKELDES-PDGIHTFLDDIV 145
|||||||||||||||||||||||||||.|||:||||. |..:||||||:|
BPUM_1917 101 DEIIPLSIVNVYGSIGLTNFGYLDKEKFGIIRELDEGRPGEVHTFLDDLV 150
BSNT_03254___ 146 AALAAAAASRIAHTHQDLQDEEKEQDEKPVVS 177
|||||||||||||:|||::|||:::..:.
BPUM_1917 151 AALAAAAASRIAHSHQDIKDEEQDRVNQV--- 179
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