Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02921 and BPUM_1916

See DNA alignment / Visit BSNT_02921 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence pep-align/BSNT_02921___thyA.1.24716.seq
#    -bsequence pep-align/BPUM_1916___thyA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02921___thyA-BPUM_1916___thyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02921___thyA-BPUM_1916___thyA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02921___thyA
# 2: BPUM_1916___thyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 280
# Identity:     115/280 (41.1%)
# Similarity:   165/280 (58.9%)
# Gaps:          17/280 ( 6.1%)
# Score: 532.5
# 
#
#=======================================

BSNT_02921___      1 MTQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVMSKQMRF     50
                         .|||..:.:.::.:|  ||      |.|..||  .|:|....||||
BPUM_1916___t      1 ----MKQYKELCRHVLQHG--DE------KGDRTGT--GTISTFGYQMRF     36

BSNT_02921___     51 DNSE-VPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNKMGVHIWDQWKQ     99
                     |..| .|:|||||:..|:.|.||||..:..:| |..|.:.||.||::|..
BPUM_1916___t     37 DLQEGFPLLTTKKLHLKSIIHELLWFLKGDTN-VKYLQENGVRIWNEWAD     85

BSNT_02921___    100 EDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWN    149
                     |:|.:|..||.| .:...|.:||.|||:..|:|.:::||:|||.|...||
BPUM_1916___t     86 ENGELGRVYGAQ-WRSWASGDGETVDQITKLIHDIEHNPNSRRLIVSAWN    134

BSNT_02921___    150 PDDLDAMSLTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVL    199
                     |.::|.|:|.||....|:||.:|||..::..||.|:.||.|||:..|.:|
BPUM_1916___t    135 PGEIDQMALPPCHCLFQFYVSNGKLSCQLYQRSADIFLGVPFNIASYALL    184

BSNT_02921___    200 QRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINP    249
                     ..|||:||..|.||::..:||.|:|..|:..:.:|:|||:...|:|.|..
BPUM_1916___t    185 TMMIAKVTNLEPGEFVHTLGDAHIYQNHLPQVNMQLEREERALPQLRITR    234

BSNT_02921___    250 EVKDFYNFTIDDFKLINYKHGDKLLFEVAV    279
                     :||..::||.|||.|.||.....:..||:|
BPUM_1916___t    235 DVKSIFDFTFDDFVLENYDPHPHIKGEVSV    264


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.