Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03251 and BPUM_1914
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_03251___ypkP.1.24716.seq
# -bsequence pep-align/BPUM_1914___ypkP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03251___ypkP-BPUM_1914___ypkP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03251___ypkP-BPUM_1914___ypkP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03251___ypkP
# 2: BPUM_1914___ypkP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 76/207 (36.7%)
# Similarity: 118/207 (57.0%)
# Gaps: 1/207 ( 0.5%)
# Score: 372.0
#
#
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BSNT_03251___ 1 MVRYSLLVVYIVYMLLKNMKQLFNQTMLDPRLSYKKQMTLVYEQPKAFLE 50
|.||..|.:|:|....|:|:.|....:.|||:||.|:|.|::|..|.|..
BPUM_1914___y 1 MFRYWFLTIYVVVSFFKSMRHLHAHELTDPRISYTKRMHLIHEHAKRFAR 50
BSNT_03251___ 51 GCIGISGSVVTIHQPEPIPHGPVLYVHPRLHLAELALIAGYIEEPAGFIA 100
|||..||||:||||.:.:|..||:|:...|:...:.|:.|::|:|..|:|
BPUM_1914___y 51 GCIDQSGSVMTIHQQKKLPDEPVIYITQELNPVTMTLLIGHLEKPFAFMA 100
BSNT_03251___ 101 NPKVFRLPFIGQWLDRMDVISDGDS-EKVYEDVTKQLEKGQSLILSLDGS 149
.|.:||.|.:.|||.:|.||....| :.:.|:..:::..|||::||....
BPUM_1914___y 101 KPNLFRYPILKQWLKKMAVIRQNQSDDALLEEAKERILSGQSVLLSEAQR 150
BSNT_03251___ 150 IDPVELAARYHLPLVMVETKGTDNMQKGSFFKRLKPADIELSFSKAYIPA 199
.....||.....|:|.:||.|||.:..|...|||.|.::::......:.:
BPUM_1914___y 151 HMAEALAEDCDCPVVPIETSGTDRLLTGKVVKRLHPVNVDIHIKAPVMMS 200
BSNT_03251___ 200 NEKQLRA 206
:..|.||
BPUM_1914___y 201 DYAQKRA 207
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