Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03249 and BPUM_1913
See
DNA alignment /
Visit
BSNT_03249 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_03249___yplQ.1.24716.seq
# -bsequence pep-align/BPUM_1913.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03249___yplQ-BPUM_1913.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03249___yplQ-BPUM_1913.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03249___yplQ
# 2: BPUM_1913
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 167/213 (78.4%)
# Similarity: 194/213 (91.1%)
# Gaps: 1/213 ( 0.5%)
# Score: 927.0
#
#
#=======================================
BSNT_03249___ 1 MFTIKEEIANAITHGIGVLLSIPALVFLIIFAANYGSAWDIISFTIFGVS 50
|||:||||||||||||||:|||||:|||::||..||:..:|:||:|||.|
BPUM_1913 1 MFTVKEEIANAITHGIGVILSIPAIVFLVLFAVQYGTVTEIVSFSIFGAS 50
BSNT_03249___ 51 MLLLYLSSTLLHSITHKKTKDILEIIDHSAIYVLIAGTYTPFLLGPLKGT 100
||||||||||||||.||||||:.||:|||||||||||||||||||||||.
BPUM_1913 51 MLLLYLSSTLLHSIRHKKTKDVFEILDHSAIYVLIAGTYTPFLLGPLKGA 100
BSNT_03249___ 101 LGFTLLVIVWSLALGGIVFKIFFVKRFILLSTFVYLVMGWLMIIAVKPLY 150
||:|||.|||:||.||||||||||||||::||.|||:|||::|||:||||
BPUM_1913 101 LGYTLLAIVWALAAGGIVFKIFFVKRFIIVSTLVYLLMGWMIIIAIKPLY 150
BSNT_03249___ 151 VSLSGAGFSLLFLGGILYSVGTIFYIWKKIPFHHAIWHSFVLGGSAAMFF 200
:.|:|.||.||.|||:|||||||||||:|||:||||||||||||||:|||
BPUM_1913 151 IGLTGPGFGLLLLGGLLYSVGTIFYIWRKIPYHHAIWHSFVLGGSASMFF 200
BSNT_03249___ 201 CVLFYCVKVPFLS 213
|:|||||.:|..
BPUM_1913 201 CILFYCVNIPAA- 212
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.