Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03249 and BPUM_1913

See DNA alignment / Visit BSNT_03249 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:44
# Commandline: needle
#    -asequence pep-align/BSNT_03249___yplQ.1.24716.seq
#    -bsequence pep-align/BPUM_1913.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03249___yplQ-BPUM_1913.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03249___yplQ-BPUM_1913.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03249___yplQ
# 2: BPUM_1913
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity:     167/213 (78.4%)
# Similarity:   194/213 (91.1%)
# Gaps:           1/213 ( 0.5%)
# Score: 927.0
# 
#
#=======================================

BSNT_03249___      1 MFTIKEEIANAITHGIGVLLSIPALVFLIIFAANYGSAWDIISFTIFGVS     50
                     |||:||||||||||||||:|||||:|||::||..||:..:|:||:|||.|
BPUM_1913          1 MFTVKEEIANAITHGIGVILSIPAIVFLVLFAVQYGTVTEIVSFSIFGAS     50

BSNT_03249___     51 MLLLYLSSTLLHSITHKKTKDILEIIDHSAIYVLIAGTYTPFLLGPLKGT    100
                     ||||||||||||||.||||||:.||:|||||||||||||||||||||||.
BPUM_1913         51 MLLLYLSSTLLHSIRHKKTKDVFEILDHSAIYVLIAGTYTPFLLGPLKGA    100

BSNT_03249___    101 LGFTLLVIVWSLALGGIVFKIFFVKRFILLSTFVYLVMGWLMIIAVKPLY    150
                     ||:|||.|||:||.||||||||||||||::||.|||:|||::|||:||||
BPUM_1913        101 LGYTLLAIVWALAAGGIVFKIFFVKRFIIVSTLVYLLMGWMIIIAIKPLY    150

BSNT_03249___    151 VSLSGAGFSLLFLGGILYSVGTIFYIWKKIPFHHAIWHSFVLGGSAAMFF    200
                     :.|:|.||.||.|||:|||||||||||:|||:||||||||||||||:|||
BPUM_1913        151 IGLTGPGFGLLLLGGLLYSVGTIFYIWRKIPYHHAIWHSFVLGGSASMFF    200

BSNT_03249___    201 CVLFYCVKVPFLS    213
                     |:|||||.:|.. 
BPUM_1913        201 CILFYCVNIPAA-    212


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