Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03249 and BPUM_1913
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence dna-align/BSNT_03249___yplQ.1.24716.seq
# -bsequence dna-align/BPUM_1913.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03249___yplQ-BPUM_1913.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03249___yplQ-BPUM_1913.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03249___yplQ
# 2: BPUM_1913
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity: 471/654 (72.0%)
# Similarity: 471/654 (72.0%)
# Gaps: 27/654 ( 4.1%)
# Score: 1594.0
#
#
#=======================================
BSNT_03249___ 1 TTGTTTACAATCAAAGAAGAGATCGCCAATGCGATTACACACGGCATCGG 50
||||||||..|.||||||||.||.||.||.||.||||||||.|||||.||
BPUM_1913 1 TTGTTTACTGTAAAAGAAGAAATTGCAAACGCCATTACACATGGCATTGG 50
BSNT_03249___ 51 TGTCCTCTTATCCATCCCAG-CATTAGTGTTTCTAATCATATTTGCGGCT 99
|||..|.||||||||.|||| |||| ||.|||||..|..||||.||.|.|
BPUM_1913 51 TGTGATTTTATCCATTCCAGCCATT-GTTTTTCTCGTGTTATTCGCTGTT 99
BSNT_03249___ 100 AATTACGGGTCTG---CATGGGACATTATCAGCTTTACAATATTCGGTGT 146
.|.|||||..||| || ||.||..|.||||||.|||||||.||||.
BPUM_1913 100 CAATACGGCACTGTCACA---GAGATCGTGAGCTTTTCAATATTTGGTGC 146
BSNT_03249___ 147 CTCTATGCTGCTGTTATATTTGAGCTCCACCCTGCTTCACAGCATCACAC 196
.||.|||||.|||.|.|||||.|||||.|||.|||||||.|||||....|
BPUM_1913 147 ATCCATGCTACTGCTCTATTTAAGCTCGACCTTGCTTCATAGCATTCGGC 196
BSNT_03249___ 197 ATAAAAAAACGAAGGACATTTTGGAGATTATTGATCA-TAGCGCGATTTA 245
||||||||||.||.||..|.||.||.|||.|.||.|| |.| ||.|||||
BPUM_1913 197 ATAAAAAAACAAAAGATGTATTTGAAATTCTCGACCACTCG-GCTATTTA 245
BSNT_03249___ 246 CGTACTCATCGCCGGAACCTACACGCCTTTTTTGCTTGGGCCGCTGAAAG 295
.|||.|.|||||.||.||.||.|||||.|||||.||.||.||..|.||||
BPUM_1913 246 TGTATTGATCGCTGGTACATATACGCCCTTTTTACTCGGACCATTAAAAG 295
BSNT_03249___ 296 GCACACTCGGCTTTACCCTGTTGGTTATCGTATGGTCACTTGC-CCTAGG 344
|..|||||||||.|||.||..|.|..||.||||||.|.||||| .|| ||
BPUM_1913 296 GTGCACTCGGCTATACGCTTCTTGCGATTGTATGGGCTCTTGCTGCT-GG 344
BSNT_03249___ 345 CGGAATCGTTTTTAAAATTTTCTTTGTGAAACGGTTTATCCTATTGTCAA 394
||||||.||.||||||||.||.||.||.||||||||||||.|..||||.|
BPUM_1913 345 CGGAATTGTCTTTAAAATCTTTTTCGTCAAACGGTTTATCATTGTGTCTA 394
BSNT_03249___ 395 CCTTCGTGTATTTAGTCATGGGGTGGCTGATGATTATTGCAGTTAAAC-- 442
||.||||.||||||.|.|||||.|||.||||.||.|||||..|.||||
BPUM_1913 395 CCCTCGTTTATTTATTAATGGGCTGGATGATTATCATTGCCATCAAACCA 444
BSNT_03249___ 443 CTTTATAT--GTTTCACTGAGCGGAGCGGGATTCAGCCTCCTTTTTCTCG 490
|||||.|| |.||.|| .||..|.||.||..|||||.|..|..|.|
BPUM_1913 445 CTTTACATTGGGTTAAC----AGGTCCAGGGTTTGGCCTCTTACTGTTAG 490
BSNT_03249___ 491 GCGGCATTTTATACTCTGTCGGGACCATCTTTTACATTTGGAAAAAGATC 540
||||..|.||.||.||.|||||.||.||||||||.||||||...||.|||
BPUM_1913 491 GCGGTCTATTGTATTCGGTCGGAACGATCTTTTATATTTGGCGGAAAATC 540
BSNT_03249___ 541 CCCTTCCATCACGCCATTTGGCACAGCTTTGTATTGGGCGGGAGCGCCGC 590
||||..|||||.||.|||||||||||||||||..|||||||.||.||..|
BPUM_1913 541 CCCTATCATCATGCGATTTGGCACAGCTTTGTTCTGGGCGGTAGTGCATC 590
BSNT_03249___ 591 CATGTTTTTCTGCGTGCTCTTCTATTGTGTAAAAGTGCCGTTCCT--TTC 638
.|||||.||||||.|.||.|||||.|||||.|| |.||||| |.|
BPUM_1913 591 AATGTTCTTCTGCATTCTGTTCTACTGTGTGAA-----CATTCCTGCTGC 635
BSNT_03249___ 639 GTAA 642
.|.|
BPUM_1913 636 ATGA 639
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