Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03248 and BPUM_1912
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence pep-align/BSNT_03248___yplP.1.24716.seq
# -bsequence pep-align/BPUM_1912___yplP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03248___yplP-BPUM_1912___yplP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03248___yplP-BPUM_1912___yplP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03248___yplP
# 2: BPUM_1912___yplP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 340
# Identity: 151/340 (44.4%)
# Similarity: 200/340 (58.8%)
# Gaps: 27/340 ( 7.9%)
# Score: 648.5
#
#
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BSNT_03248___ 1 MNSAPKLNTFQHLIGEHQTFLEAKRIAKQFSLSELPVLITGKIGTGKNHF 50
...::|..:.||||....|..:||||:..|.||||||:|||||..|
BPUM_1912___y 1 ----MTTHSFTSIYGEHQEIKRAIHLAKQFTKHEQPVLITGEIGTGKTRF 46
BSNT_03248___ 51 AHAIHLESSRSNEPFMSVNCSTHSEETLFHELFGPNGNTGVFQKAVRGTL 100
|:.| ..:|.||.....:.|....|.|| ...|.:..|..|
BPUM_1912___y 47 AYEI-AHASASNASLTHLYCPILDEATL----------QKAFTEKTRQIL 85
BSNT_03248___ 101 FLDDVWRMPASVQAQLLKALD-SDTEKPRMICASADRSVE-----HTFRQ 144
:||::..:...:|.|:::.|: |...| |.|::..|:| .||..
BPUM_1912___y 86 YLDEIASLSIPMQHQVIRFLEISPATK---IIATSSLSIEALRVSSTFLP 132
BSNT_03248___ 145 DLFYRLNILTLTLPELSERKSDIPLLTQHFLSNSGQQFLIDPSVFPVLEK 194
:||||||:..|.||.|::||:|||:||..|.........|||||:..|::
BPUM_1912___y 133 ELFYRLNVFHLPLPSLADRKTDIPVLTTAFFQELSMTPDIDPSVWETLQE 182
BSNT_03248___ 195 HAFEGNVRELKNAADYMAAVSSGGTIQPYDLPPYIRGAIDRKT-SKKKAK 243
:.|||||:||||...|.|.:..|.|:..:.|||::...:..:. .||:..
BPUM_1912___y 183 YPFEGNVQELKNIVQYAAVILEGQTVFLHHLPPFVLTPLSPEVKGKKEEH 232
BSNT_03248___ 244 LLTLMEKAEFLFILETIKVLNEKGEPASRRIISEHSKNTQTSLTPQQVRS 293
.||||||.||:|:||.||.||||||.|||||:||.||.....||||||||
BPUM_1912___y 233 QLTLMEKQEFVFLLEAIKSLNEKGEAASRRILSELSKQGDIPLTPQQVRS 282
BSNT_03248___ 294 RLDYLEKKDYVTKSRGRAGTKITFEGLSFIETLKNQMI-- 331
|||.||||.||||.:||||||||.|||||:::|...:.
BPUM_1912___y 283 RLDDLEKKAYVTKGKGRAGTKITLEGLSFLKSLDGYIPVQ 322
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