Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03241 and BPUM_1906
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence pep-align/BSNT_03241___ypmS.1.24716.seq
# -bsequence pep-align/BPUM_1906___ypmS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03241___ypmS-BPUM_1906___ypmS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03241___ypmS-BPUM_1906___ypmS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03241___ypmS
# 2: BPUM_1906___ypmS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 114/188 (60.6%)
# Similarity: 143/188 (76.1%)
# Gaps: 1/188 ( 0.5%)
# Score: 585.0
#
#
#=======================================
BSNT_03241___ 1 MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDSSESEYGFQVTST 50
|.|||.|||||||||.::......|:||||.|:......:|||.|.::|:
BPUM_1906___y 1 MKKWKSLFFILLAINLLIVLACGILMLLPGGQSASTKELKSEYSFNISSS 50
BSNT_03241___ 51 KESLAAFVNSYLNDKASNKL-DYKVEIDDDVHVAGKIKAFSTSIDAFIAF 99
||||.:|:|.||.::.|:.: |:.|.||.||.|.|.|||||::|||.::|
BPUM_1906___y 51 KESLTSFINDYLKNQGSSDMPDFHVAIDQDVKVTGAIKAFSSTIDANVSF 100
BSNT_03241___ 100 EPTVKKNGDVELNVTKFSLGKLSIPISFVLNYMDSFYELPSFVHVHPGEK 149
.|||:.||||.|.|...|:|:||||:||||:||..|||||.||||.|.:|
BPUM_1906___y 101 TPTVEDNGDVLLKVDGLSIGQLSIPVSFVLSYMGQFYELPEFVHVKPDQK 150
BSNT_03241___ 150 SIEVRLSEMPLTNGMYVKADKINLEKDEIEFSYYHPKQ 187
::|||||||||||.|||||:||:||.||||||||||||
BPUM_1906___y 151 TVEVRLSEMPLTNDMYVKANKIDLENDEIEFSYYHPKQ 188
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