Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03237 and BPUM_1902

See DNA alignment / Visit BSNT_03237 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_03237___ypoP.1.24716.seq
#    -bsequence pep-align/BPUM_1902.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03237___ypoP-BPUM_1902.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03237___ypoP-BPUM_1902.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03237___ypoP
# 2: BPUM_1902
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      96/143 (67.1%)
# Similarity:   117/143 (81.8%)
# Gaps:           2/143 ( 1.4%)
# Score: 496.0
# 
#
#=======================================

BSNT_03237___      1 MKVRTQMMYDMETLLRKVFKQIRNEINEILDKELSRNEFTILRILSEQGP     50
                     |:.|.:|||:|:||||.||||||.|||.:|:.|||||||.||.:|.|||.
BPUM_1902          1 MEQRKKMMYEMDTLLRTVFKQIRYEINSLLENELSRNEFLILNLLREQGA     50

BSNT_03237___     51 KKVTEFAPILEVSASHITAVTDALVEKEWITRIRSKEDRRIIRIHITEAG    100
                     |||||||.||.|||||||||||.||||.||||||||||||||:||:|:.|
BPUM_1902         51 KKVTEFASILGVSASHITAVTDTLVEKGWITRIRSKEDRRIIKIHLTDKG    100

BSNT_03237___    101 EKVLQHFNEKKTEYFFKRFDCYTDAELATLIELFSKLDKKR--    141
                     :::.:||.:||||||.:||:.:.|.||.|:|:||.||||.:  
BPUM_1902        101 KEITEHFEKKKTEYFMERFESFDDEELKTMIKLFKKLDKSQKD    143


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.