Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03236 and BPUM_1901
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence pep-align/BSNT_03236___msrA.1.24716.seq
# -bsequence pep-align/BPUM_1901___msrA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03236___msrA-BPUM_1901___msrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03236___msrA-BPUM_1901___msrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03236___msrA
# 2: BPUM_1901___msrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 136/178 (76.4%)
# Similarity: 153/178 (86.0%)
# Gaps: 1/178 ( 0.6%)
# Score: 772.0
#
#
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BSNT_03236___ 1 MSEKKEIATFAGGCFWCMVKPFDEQPGIEKVVSGYTGGHTENPTYEEVCS 50
||||:|:|||||||||||||||||||||.||.||||||||.||||||||:
BPUM_1901___m 1 MSEKQELATFAGGCFWCMVKPFDEQPGIIKVESGYTGGHTVNPTYEEVCT 50
BSNT_03236___ 51 ETTGHREAVQITFNPDVFPYEKLLELFWQQIDPTDAGGQFADRGSSYRAA 100
.||||||||||||:||:|||||||||:||||||||.||||.|||.|||..
BPUM_1901___m 51 NTTGHREAVQITFDPDIFPYEKLLELYWQQIDPTDDGGQFGDRGESYRTG 100
BSNT_03236___ 101 IFYHNDKQKELAEASKQRLAESGIFKDPIVTDILKAEPFYEAEGYHQHFY 150
|:.|:|:|::||||||::|.|||||:.||||:||.|.|||.||.||||:|
BPUM_1901___m 101 IYVHHDEQRKLAEASKEKLNESGIFQKPIVTEILDAAPFYPAEEYHQHYY 150
BSNT_03236___ 151 KKNPAHYQRYRTGSGRAGFISEHWGAK- 177
|||..||:||..||||||||..||..|
BPUM_1901___m 151 KKNKIHYERYHVGSGRAGFIESHWSDKS 178
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