Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03230 and BPUM_1897

See DNA alignment / Visit BSNT_03230 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence pep-align/BSNT_03230.1.24716.seq
#    -bsequence pep-align/BPUM_1897___cgeB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03230-BPUM_1897___cgeB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03230-BPUM_1897___cgeB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03230
# 2: BPUM_1897___cgeB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     114/321 (35.5%)
# Similarity:   166/321 (51.7%)
# Gaps:          37/321 (11.5%)
# Score: 528.5
# 
#
#=======================================

BSNT_03230         1 -----------------------------MSADTLEAETLV----KIETF     17
                                                  .|...:..|:|.    ||.||
BPUM_1897___c      1 MKLLYISSGYGGIYHMFDQWVEESFIDSPFSCVKINRESLPTHMHKIRTF     50

BSNT_03230        18 QPDFALLMVGDRVPHDWLTWLKGKGIPVYVWLTEDPFYMDISLQVIKLAD     67
                     .|||.|:|:||.||.:.|...|.:.||:.:|:||||||.|:|......|.
BPUM_1897___c     51 SPDFVLMMIGDHVPSEVLHQFKQEKIPIVLWMTEDPFYTDVSAACAHDAR    100

BSNT_03230        68 AILTIEQNAVLYYQGLGYQHVYYVPIPVNHRLFKK-MGTEQSYHSNLLII    116
                     .||||::.|:.:|:.||....||.|||.|.|:|:| ...|:....::.:|
BPUM_1897___c    101 LILTIDEGALPFYKQLGIGDAYYFPIPANTRIFQKNESPEKMCIYDIALI    150

BSNT_03230       117 GYPYPNRVQLMKEAV-HLPFTVRVIGKEWGKYLPKKVLKQPHIDVVSTWV    165
                     |||||||.:.:...: ...:.:.|.||||.::|.|.......:.:|:.|:
BPUM_1897___c    151 GYPYPNRTKAIDTLLQQKKWRILVAGKEWHRHLNKIRRHDRDLTLVTNWL    200

BSNT_03230       166 PPEQAVHYYNGADIVINAHRPYHFAFNQNTMRIKNASFNNRTFDIAACEA    215
                     .|:|....|..:.||:|.|||..||:|:|...|:|.|.|||.|||||..:
BPUM_1897___c    201 SPQQMAGIYQQSAIVLNPHRPAQFAYNKNKAMIQNVSLNNRAFDIAAAGS    250

BSNT_03230       216 FQLTDLPAAHPFSSFISYHGMNDFKEKAAFYINHPEERQKAAAANYKETV    265
                     ||||||.....||||..|...:|..|:..:|.::..:|:..|..||::.|
BPUM_1897___c    251 FQLTDLQPPPAFSSFAFYKDKDDMLEQVEYYGSNAVKRKAIAQNNYEQVV    300

BSNT_03230       266 PAFTFDELPAKL-KAIHLALS    285
                     ...||:..|.:| :.:..|| 
BPUM_1897___c    301 SWNTFESFPHRLYEIVKSAL-    320


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