Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03209 and BPUM_1889

See DNA alignment / Visit BSNT_03209 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_03209___yodN.1.24716.seq
#    -bsequence pep-align/BPUM_1889___yodN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03209___yodN-BPUM_1889___yodN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03209___yodN-BPUM_1889___yodN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03209___yodN
# 2: BPUM_1889___yodN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity:     186/226 (82.3%)
# Similarity:   202/226 (89.4%)
# Gaps:           0/226 ( 0.0%)
# Score: 995.0
# 
#
#=======================================

BSNT_03209___      1 MKQNKPKFQVGDIVVVIMYGTVGTITKVHQIDKHYLYEVNHNEVLYFESS     50
                     ||...||:||||||||:|||||||||||||||:|||||||||||||||:|
BPUM_1889___y      1 MKAKAPKYQVGDIVVVVMYGTVGTITKVHQIDQHYLYEVNHNEVLYFETS     50

BSNT_03209___     51 IQLYKDYEGVIVDMEKLDIEYEFLIGDVVYVKDYGKELFRIIGHRTEIWR    100
                     :|||.:|:|||||.|||||||||||||||||||||||||:||||||||||
BPUM_1889___y     51 LQLYDEYDGVIVDTEKLDIEYEFLIGDVVYVKDYGKELFKIIGHRTEIWR    100

BSNT_03209___    101 YLEDGWEDIIYELTRLKDGEWLETEEEDLTLVLRKYEMDQFVHQLLFVHY    150
                     ||:|||||:|||||||||||||||||||||||||||||||||||||||||
BPUM_1889___y    101 YLDDGWEDVIYELTRLKDGEWLETEEEDLTLVLRKYEMDQFVHQLLFVHY    150

BSNT_03209___    151 VGETGHEIGEDIASSALLQFEGDDEDQDTLHILAVSIVDELLDIYNDYKI    200
                     ||||..|:.||:..:||||.|...|.:.:|..||||||||||||||||||
BPUM_1889___y    151 VGETSKEMEEDMVQTALLQLEEKQESEASLEFLAVSIVDELLDIYNDYKI    200

BSNT_03209___    201 LYEMFHDEEYKDMMMFVLESLKEHFS    226
                     |||.|.|.||||||.|:||||.|||.
BPUM_1889___y    201 LYEFFEDPEYKDMMDFILESLHEHFG    226


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