Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03209 and BPUM_1889
See
Amino acid alignment /
Visit
BSNT_03209 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_03209___yodN.1.24716.seq
# -bsequence dna-align/BPUM_1889___yodN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03209___yodN-BPUM_1889___yodN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03209___yodN-BPUM_1889___yodN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03209___yodN
# 2: BPUM_1889___yodN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 699
# Identity: 522/699 (74.7%)
# Similarity: 522/699 (74.7%)
# Gaps: 36/699 ( 5.2%)
# Score: 1895.0
#
#
#=======================================
BSNT_03209___ 1 ATGAA-GCAAAATAAACCGAAATTCCAAGTAGGGGATATCGTAGTCGTCA 49
||||| ||.||| ..|||.||||..||||||||||||||.||.|||||..
BPUM_1889___y 1 ATGAAGGCGAAA-GCACCAAAATATCAAGTAGGGGATATTGTCGTCGTTG 49
BSNT_03209___ 50 TTATGTATGGAACAGTCGGCACCATCACAAAAGTACACCAAATTGATAAA 99
|.|||||.||.||||||||.||.||.||||||||.||.||||||||..|.
BPUM_1889___y 50 TCATGTACGGCACAGTCGGAACGATTACAAAAGTCCATCAAATTGACCAG 99
BSNT_03209___ 100 CACTATCTTTATGAAGTCAATCATAACGAAGT--TTTATACTTTGAATCA 147
||||||.|.|||||.|||||||||||.||.|| ||||| ||||||.||
BPUM_1889___y 100 CACTATTTGTATGAGGTCAATCATAATGAGGTGCTTTAT--TTTGAAACA 147
BSNT_03209___ 148 TCTATTCAGCTTTATAAAGATTATGAGGGTGTCATTGTCGACATGGAGAA 197
||..||||||||||..|.||.||.||.||.||.|||||.||.|..||.||
BPUM_1889___y 148 TCACTTCAGCTTTACGATGAGTACGACGGGGTGATTGTGGATACAGAAAA 197
BSNT_03209___ 198 GCTTGATATTGAGTATGAATTCCTTATTGGGGACGTTGTTTATGTAAAAG 247
|||.||.|||||.|||||.|||||.|||||.||.|||||.||||||||||
BPUM_1889___y 198 GCTGGACATTGAATATGAGTTCCTCATTGGCGATGTTGTATATGTAAAAG 247
BSNT_03209___ 248 ATTATGGAAAAGAACTCTTTCGCATTATCGGCCATAGAACAGAAATTTGG 297
|.||.||||||||.||.|||...|||||.||||||.|.||.|||||.|||
BPUM_1889___y 248 ACTACGGAAAAGAGCTATTTAAAATTATTGGCCATCGGACTGAAATATGG 297
BSNT_03209___ 298 AGATATTTAGAAGATGGCTGGGAAGATATCATTTATGAGCTGACCCGTTT 347
.||||..|.||.|||||||||||||||.|||||||.||.||.||..|..|
BPUM_1889___y 298 CGATACCTTGATGATGGCTGGGAAGATGTCATTTACGAACTCACGAGGCT 347
BSNT_03209___ 348 AAAGGATGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTGC 397
||||||.|||||||||||.|||||.||.||.||.||..|.|||||.||.|
BPUM_1889___y 348 AAAGGACGGAGAGTGGCTGGAAACAGAAGAGGAAGACTTAACGCTTGTCC 397
BSNT_03209___ 398 TTAGAAAATATGAAATGGACCAGTTTGTGCATCAGCTGTTGTTTGTCCAT 447
|.||.||||||||.|||||||||||.||.||||||||..|.|||||.|||
BPUM_1889___y 398 TGAGGAAATATGAGATGGACCAGTTCGTTCATCAGCTTCTTTTTGTGCAT 447
BSNT_03209___ 448 TATGTCGGAGAAACTGGCCATGAGATCGGCGAAGATATCG---CATCGTC 494
||.||.||.||||||....|.||.||.|..||||||||.| .|.||
BPUM_1889___y 448 TACGTGGGTGAAACTTCAAAAGAAATGGAAGAAGATATGGTGCAAACG-- 495
BSNT_03209___ 495 TGCTCTTCTTCAGTTTGAAGGCGATGATGAAG-ATCAAGATACC----CT 539
|||||..|.||.||.|||| || |.|||||.|.| |.
BPUM_1889___y 496 -GCTCTATTACAATTAGAAG----------AGAAACAAGAAAGCGAAGCA 534
BSNT_03209___ 540 TCAC-----ATCCTTGCTGTGTCAATTGTTGATGAGCTTCTGGATATTTA 584
|||| .||||.|||||.||.||.||.|||||||||||.||||||||
BPUM_1889___y 535 TCACTAGAATTCCTCGCTGTATCTATAGTGGATGAGCTTCTTGATATTTA 584
BSNT_03209___ 585 TAATGACTACAAAATTCTGTACGAAATGTTTC-ATGATGAAGAATATAAA 633
|||||||||.||||||||.|||| |||.|||| |.|||..||||||.|||
BPUM_1889___y 585 TAATGACTATAAAATTCTCTACG-AATTTTTCGAAGATCCAGAATACAAA 633
BSNT_03209___ 634 GACATGAT-GATGTTTGTTTTGGAAAGTTTAAAAGAGCATTTCAGTTAG 681
||.||||| ||| |||.|.||||||||||||.|.||||||||..||||.
BPUM_1889___y 634 GATATGATGGAT-TTTATATTGGAAAGTTTACACGAGCATTTTGGTTAA 681
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.