Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03206 and BPUM_1887

See DNA alignment / Visit BSNT_03206 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_03206___yozD.1.24716.seq
#    -bsequence pep-align/BPUM_1887___yozD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03206___yozD-BPUM_1887___yozD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03206___yozD-BPUM_1887___yozD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03206___yozD
# 2: BPUM_1887___yozD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 60
# Identity:      40/60 (66.7%)
# Similarity:    47/60 (78.3%)
# Gaps:           6/60 (10.0%)
# Score: 194.5
# 
#
#=======================================

BSNT_03206___      1 MKEIDLVIDTEEIAEFFYRELARRGYIPSEDELFEIADITFDYLIEKCMI     50
                     |||.||||||||||||||.||.:|||||:|.|.||:|||||:|:::|.||
BPUM_1887___y      1 MKEADLVIDTEEIAEFFYMELIKRGYIPAELETFELADITFEYMLKKTMI     50

BSNT_03206___     51 NEELDEDE--     58
                     .||    |  
BPUM_1887___y     51 VEE----EAW     56


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