Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03204 and BPUM_1885

See DNA alignment / Visit BSNT_03204 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_03204___yodL.1.24716.seq
#    -bsequence pep-align/BPUM_1885.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03204___yodL-BPUM_1885.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03204___yodL-BPUM_1885.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03204___yodL
# 2: BPUM_1885
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      55/106 (51.9%)
# Similarity:    77/106 (72.6%)
# Gaps:           4/106 ( 3.8%)
# Score: 318.0
# 
#
#=======================================

BSNT_03204___      1 ---MLSVFKKKSCSYDVTIFQTPRFGEKKGYRAVYRTELNGSDHQDVLKR     47
                        .|..|:||..::.:||:|||.:|...|::.||||::.|..|.|||::
BPUM_1885          1 MQLTLRFFQKKPSAFHLTIYQTPEYGAASGHQPVYRTKIGGRTHLDVLEK     50

BSNT_03204___     48 AFSLFNVFDTVPSDYDARFMATGDVILIDEGRKGKTYYQLLPAGWRKINR     97
                     |||.|||.|||||||:||||.|||:::||:.:|||.||||.||||::..|
BPUM_1885         51 AFSTFNVHDTVPSDYNARFMTTGDIVVIDDKKKGKCYYQLFPAGWKRSER    100

BSNT_03204___     98 LIVQTT    103
                     |:..: 
BPUM_1885        101 LMTMS-    105


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