Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03200 and BPUM_1884
See
DNA alignment /
Visit
BSNT_03200 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence pep-align/BSNT_03200___deoD.1.24716.seq
# -bsequence pep-align/BPUM_1884___deoD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03200___deoD-BPUM_1884___deoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03200___deoD-BPUM_1884___deoD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03200___deoD
# 2: BPUM_1884___deoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 189/233 (81.1%)
# Similarity: 211/233 (90.6%)
# Gaps: 2/233 ( 0.9%)
# Score: 964.0
#
#
#=======================================
BSNT_03200___ 1 MSVHIGAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTG 50
|||||||||||||:||||||||||||:||:||||:||||||||||||:||
BPUM_1884___d 1 MSVHIGAEKGQIAETVLLPGDPLRAKYIADTYLEDVECYNEVRGMYGYTG 50
BSNT_03200___ 51 TYKGKKISVQGTGMGVPSISIYVNELIQSFDVQNLIRVGSCGAIRKDVKV 100
|||||::||||||||||||||||||||||:||||||||||||||::||.|
BPUM_1884___d 51 TYKGKRVSVQGTGMGVPSISIYVNELIQSYDVQNLIRVGSCGAIKRDVNV 100
BSNT_03200___ 101 RDVILAMTSSTDSQMNRVAFGSIDFAPCADFELLKNAYDAAKDKGVPVTV 150
||||||.||||||||||||||.||:||||||.|||.|||.|:.|.|.|.|
BPUM_1884___d 101 RDVILAQTSSTDSQMNRVAFGPIDYAPCADFGLLKKAYDTAEAKNVAVRV 150
BSNT_03200___ 151 GSVFTADQFYNDDSQIEKLAKYGVLGVEMETTALYTLAAKHGRKALSILT 200
|:||||||||| :..:|.:|:||:|.:||||||||:||||..||||||||
BPUM_1884___d 151 GNVFTADQFYN-EKPLELMAQYGILAIEMETTALYSLAAKFDRKALSILT 199
BSNT_03200___ 201 VSDHVLTGEETTAEERQTTFHDMIEVALHSVSQ 233
||||||||||||||||||||.:||.:||.||.
BPUM_1884___d 200 VSDHVLTGEETTAEERQTTFDEMILIALDSVL- 231
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.