Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03200 and BPUM_1884

See DNA alignment / Visit BSNT_03200 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_03200___deoD.1.24716.seq
#    -bsequence pep-align/BPUM_1884___deoD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03200___deoD-BPUM_1884___deoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03200___deoD-BPUM_1884___deoD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03200___deoD
# 2: BPUM_1884___deoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity:     189/233 (81.1%)
# Similarity:   211/233 (90.6%)
# Gaps:           2/233 ( 0.9%)
# Score: 964.0
# 
#
#=======================================

BSNT_03200___      1 MSVHIGAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTG     50
                     |||||||||||||:||||||||||||:||:||||:||||||||||||:||
BPUM_1884___d      1 MSVHIGAEKGQIAETVLLPGDPLRAKYIADTYLEDVECYNEVRGMYGYTG     50

BSNT_03200___     51 TYKGKKISVQGTGMGVPSISIYVNELIQSFDVQNLIRVGSCGAIRKDVKV    100
                     |||||::||||||||||||||||||||||:||||||||||||||::||.|
BPUM_1884___d     51 TYKGKRVSVQGTGMGVPSISIYVNELIQSYDVQNLIRVGSCGAIKRDVNV    100

BSNT_03200___    101 RDVILAMTSSTDSQMNRVAFGSIDFAPCADFELLKNAYDAAKDKGVPVTV    150
                     ||||||.||||||||||||||.||:||||||.|||.|||.|:.|.|.|.|
BPUM_1884___d    101 RDVILAQTSSTDSQMNRVAFGPIDYAPCADFGLLKKAYDTAEAKNVAVRV    150

BSNT_03200___    151 GSVFTADQFYNDDSQIEKLAKYGVLGVEMETTALYTLAAKHGRKALSILT    200
                     |:||||||||| :..:|.:|:||:|.:||||||||:||||..||||||||
BPUM_1884___d    151 GNVFTADQFYN-EKPLELMAQYGILAIEMETTALYSLAAKFDRKALSILT    199

BSNT_03200___    201 VSDHVLTGEETTAEERQTTFHDMIEVALHSVSQ    233
                     ||||||||||||||||||||.:||.:||.||. 
BPUM_1884___d    200 VSDHVLTGEETTAEERQTTFDEMILIALDSVL-    231


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