Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03197 and BPUM_1882

See DNA alignment / Visit BSNT_03197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence pep-align/BSNT_03197___yodI.1.24716.seq
#    -bsequence pep-align/BPUM_1882___yodI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03197___yodI-BPUM_1882___yodI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03197___yodI-BPUM_1882___yodI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03197___yodI
# 2: BPUM_1882___yodI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      57/83 (68.7%)
# Similarity:    66/83 (79.5%)
# Gaps:           0/83 ( 0.0%)
# Score: 313.0
# 
#
#=======================================

BSNT_03197___      1 MERYYHLCKNHQGKVVRITERGGRVHVGRITRVTRDRVFIAPTGGGPRGF     50
                     ||||..||:.|.|||.|||:|.||||||||.|||..:|:|.|.||...||
BPUM_1882___y      1 MERYQKLCQQHMGKVARITDRNGRVHVGRIERVTNRKVYIRPVGGSRGGF     50

BSNT_03197___     51 GYGYWGGYWGYGAAYGISLGLITGVALAGLFFW     83
                     |:||:|||:|:||||||.||.|||.|||||||:
BPUM_1882___y     51 GFGYYGGYYGWGAAYGIGLGFITGFALAGLFFF     83


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